Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02645 ATGAACAATGAGGATCCTGGCATTTCAGGCAAACACTATATAGATGCGGTGAATTTTGGTCTAGGCAACCAAGTCTCTTGTGCTGAGGATGGACATGACATATGTTACCAGACGGGTGAAGAGTTTTCTGCGGAGTTCTTACGTGATCGAGTTGCCTTAAGAAGAATTCCTGTCACAACTGACACAGACATGCGTCTGCCAAACAGGCTAAGGAGAGCAGATTCAGATGGTAACTCGGATTTGTCAGAGTTTGCATTTGCCAGAGGATGTGTTGGTGAAGTTGACAACAGGACCTATCCTAATAATTTGAACAGATACCAGTTTGAACAAGGTGGTATCAGACAAGTATCAGGTACATTTTCTAGACAACTATCAGGGAACTTTTCGGAGGGAAGTGGTGGAGATCAAGTTAATTCAGGACCAAATACTTCATCTATGTACGTTGACTCACCTCAATCATACCATCCTTATGCATCAGTATTCACAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTTTGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATTAGGAAGAGCATGGCATGGGAGGAACTTATGAGGAAGACTTCTGCTATCTGCAGTCAAACTCACACTATCAAGTACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCAACGAGGATCTTCATCATATGATCGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGCCTCGCAACGGCTGAGGATTTTTCTCATTCCTTTAAATGAATGTGAGAGTTTAAGTTCCAATGAAGCAATAGTCAATCAGCAAAGTGATGTGGATTATCATTATGTTGTTGCTGTTAACAATATGCTGGATCCAAGTCCACAACAGATTTCCAGTGCGCGAAGTTTAGCAAGCCATACAAGCCAGTTTGGAAATACCATTGATTACAACACTCCACATTTTCACAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAAGACTGCACCCCAACCTCTCCAAATTTTGCAGGCCTACTCTCAAAACCCAGTCCTCAATATTTTACAGCCCTAGCTGGCCAATCATTCAATCAAATGCCTCCTTTACCTCCTGCTTGTGATCACCAAAATTCTAATGGACAGCTATTTATGGATAAACCATATAATGCTATGAATGAAACCATTACTCCCTTTGTTACGGAAAAAGTTCCACATGACAATACTCTGTATGTAGACAATGCCAATTATGTTGATCCAGTTGCATACTATAACAATCTTGCTCAAGGGCCTAGGCGCGTGAATTACCATCCTAATAATCAATATATAAGGGAGTCTGACCAGATCAGGAGGCCTCGTGAGAATCTTCATCTTCACAGACATAACAGAAGCAACGACTTTGTCACTTCTGCAATATGTAATCTAAATAATACGAGTTATGAGAGACCTTTAATTACCGGTGATGGTTCATATCATTTTAACAATATTGTCTCTCATCCTCACGAGTCTCCAAGTTTATTGTCAGAATCTGATCCTAGAGAGGGATCTCGGTACACAATGTTGCATGCACACTCTGACACAACACTTAACGAGAATGATGAGAACTATAAGGTCCACTTGCAATTTCCCCGCAATGTAGAGAGAGACAATTTTCTATCACGAACAAATTCAAATCATTTAGAAGATTTTTCATTACAGCCTGGAGAGATAGTTGATAGGAAAGAGCACCTGGCTAAGTATCAAAATTTGCCCGTTTTCGGAATTACTAATAGCTATAAGAAAGTATTAGAAATTGGTAAAGAGAGCTTGCAACATGCAGAAAAGAACAATGATTTCTTTGATGAAACGAACAATGCCATAGATTTTAAACATTTACAGCACATCTACACTCCACATGTTGTTTGCTCATCTTCTCCAGATTTACAGAGAAGTGAATGCAATGCATTTACCGAGTCATTTGTCTCTCTCGAATCCCCACTAAACCTGAGGGGGCAAACAAGTGTGGTACAATTAGACAGAACCACTTCTGAGTTTTCCATGAGGAGCCGAAATTCATCAAAAATACATCACCAATATGCTATGTCGGCGGCAGATGACAGTCAACCACTTTTCCCTGGCCCTTTTAAGTCCCAAAATGGCAAAGAATCTTCCTTACCTATCTCATATATGGACATGATTTCTTCCCTGAGAGAGGCTGTTATACCTGTCGGAGATCCTGCGTACTACCTGCACCAGAAGGAAGAAAACACAATCGTTGAGAATCGGACTTCTGAATATATTGATGAATTCTGTGTCAACAGGCCAGTGTCTGATTCCAAGGGACCTACGGATTATATTTCTTCGGGTATCCAGTCATGCTTAAAAGTTGTTTCAAATGTAGATGAAAAGGTTGAAGTTGAACCTACATCTCCTAAAAAGGAAGGGATAGAACGTGATAGTCCAGAATCTGAAAGTAAGCATGCAAGGCCTGAAAGTGGAAACTTGAACAAGTCTACTGGTGATAGAGCAACTGCTGAAACAGAGTCTGAAATTTATGGATTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTGGGATCTGGAACCTTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGCAGTTGTTTCTCGGGTAGATTGTCAGAGCAAGAGCGGTTGATTAAGGACTTCTGGAGGGAGGCACAGATCCTGTCAACTCTTCACCATCCCAATGTGGTGGCGTTTTATGGGGTAGTTCCAAATGGCCCTGGTGGAACACTGGCGACAGTAACGGAATACATGGTGCATGGATCACTCAAGAATGTTCTCATGAAGAGGGAAAAAGTGCTTGACCGTCGTAAAAGGGTCCTGATAGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTGCATTTTGATTTAAAGTGTGATAATTTACTTGTCAATCTGGGCGATCCTGAACGACCTGTATGCAAGGTTGGAGATTTTGGCCTATCCAGAATAAAACGTAATACACTTGTTTCAGGTGGTGTCCGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGTAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATTGGAGGTATTGTCAATAATACGCTCAGGCCTCCTATTCCAAAACGATGTGATTCTGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGTCCTGATCCTGCCGCAAGACCAACCTTCACAGATATTAAAATTAGACTTCGCAACATATCAGCTGCAGTTCCCAAAAAGAGACATAACATTGGCAATCGATGA 3444 0.4114 MNNEDPGISGKHYIDAVNFGLGNQVSCAEDGHDICYQTGEEFSAEFLRDRVALRRIPVTTDTDMRLPNRLRRADSDGNSDLSEFAFARGCVGEVDNRTYPNNLNRYQFEQGGIRQVSGTFSRQLSGNFSEGSGGDQVNSGPNTSSMYVDSPQSYHPYASVFTEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKSMAWEELMRKTSAICSQTHTIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGASQRLRIFLIPLNECESLSSNEAIVNQQSDVDYHYVVAVNNMLDPSPQQISSARSLASHTSQFGNTIDYNTPHFHRDSSTSAFASEMKDCTPTSPNFAGLLSKPSPQYFTALAGQSFNQMPPLPPACDHQNSNGQLFMDKPYNAMNETITPFVTEKVPHDNTLYVDNANYVDPVAYYNNLAQGPRRVNYHPNNQYIRESDQIRRPRENLHLHRHNRSNDFVTSAICNLNNTSYERPLITGDGSYHFNNIVSHPHESPSLLSESDPREGSRYTMLHAHSDTTLNENDENYKVHLQFPRNVERDNFLSRTNSNHLEDFSLQPGEIVDRKEHLAKYQNLPVFGITNSYKKVLEIGKESLQHAEKNNDFFDETNNAIDFKHLQHIYTPHVVCSSSPDLQRSECNAFTESFVSLESPLNLRGQTSVVQLDRTTSEFSMRSRNSSKIHHQYAMSAADDSQPLFPGPFKSQNGKESSLPISYMDMISSLREAVIPVGDPAYYLHQKEENTIVENRTSEYIDEFCVNRPVSDSKGPTDYISSGIQSCLKVVSNVDEKVEVEPTSPKKEGIERDSPESESKHARPESGNLNKSTGDRATAETESEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLIKDFWREAQILSTLHHPNVVAFYGVVPNGPGGTLATVTEYMVHGSLKNVLMKREKVLDRRKRVLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIVMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTDIKIRLRNISAAVPKKRHNIGNR 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02645 1147 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 189 271 - -
Viun7g02645 1147 ProSitePatterns Protein kinases ATP-binding region signature. 873 894 IPR017441 GO:0005524
Viun7g02645 1147 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 955 1146 - -
Viun7g02645 1147 MobiDBLite consensus disorder prediction 124 147 - -
Viun7g02645 1147 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 860 954 - -
Viun7g02645 1147 SMART PB1_new 184 271 IPR000270 GO:0005515
Viun7g02645 1147 ProSiteProfiles Protein kinase domain profile. 867 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02645 1147 SMART serkin_6 867 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02645 1147 PRINTS Tyrosine kinase catalytic domain signature 949 962 IPR001245 GO:0004672|GO:0006468
Viun7g02645 1147 PRINTS Tyrosine kinase catalytic domain signature 1101 1123 IPR001245 GO:0004672|GO:0006468
Viun7g02645 1147 PRINTS Tyrosine kinase catalytic domain signature 1057 1079 IPR001245 GO:0004672|GO:0006468
Viun7g02645 1147 PRINTS Tyrosine kinase catalytic domain signature 986 1004 IPR001245 GO:0004672|GO:0006468
Viun7g02645 1147 PANTHER SERINE-THREONINE PROTEIN KINASE 214 1129 - -
Viun7g02645 1147 Gene3D - 188 270 - -
Viun7g02645 1147 CDD PB1_UP2 173 269 - -
Viun7g02645 1147 CDD STKc_MAP3K-like 873 1126 - -
Viun7g02645 1147 MobiDBLite consensus disorder prediction 806 851 - -
Viun7g02645 1147 Pfam PB1 domain 185 268 IPR000270 GO:0005515
Viun7g02645 1147 SUPERFAMILY Protein kinase-like (PK-like) 856 1127 IPR011009 -
Viun7g02645 1147 MobiDBLite consensus disorder prediction 806 836 - -
Viun7g02645 1147 SUPERFAMILY CAD & PB1 domains 185 278 - -
Viun7g02645 1147 Gene3D Phosphorylase Kinase; domain 1 860 954 - -
Viun7g02645 1147 Pfam Protein tyrosine and serine/threonine kinase 869 1127 IPR001245 GO:0004672|GO:0006468
Viun7g02645 1147 Gene3D Transferase(Phosphotransferase) domain 1 955 1146 - -
Viun7g02645 1147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02645 Viun-Chr7 30166496 30174153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02645 37 301 MAP Kinase Kinase Kinase AT1G16270 42.322 2.78e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Viun7g02645 PK_Tyr_Ser-Thr 7.5e-63 CL0016