Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02633 ATGTCGGATGCGCCAGCCAGCCCGAGTCACGAGAGTGGGGGCGAGCAGAGCCCGCGCGGTTCTTCGTCTGGTGCGAGGGAACAAGACCGCTTTCTTCCTATTGCCAATATCAGCCGCATCATGAAGAAGGGTCTTCCTCCCAACGGCAAGATTGCTAAAGACGCCAAAGATACCATGCAAGAATGTGTTTCTGAGTTCATCAGCTTCATTACCAGCGAGGCGAGTGACAAATGTCAGAAAGAGAAGAGAAAGACTATCAATGGAGACGATTTGTTATGGGCAATGGCCACTTTGGGTTTTGAAGACTACATAGAACCGCTTAAGGTGTACCTGGCAAGGTACAGAGAGGCGGAGGGTGACACCAAAGGATCTGCTAGAGGTGGTGATGGATCTGGTAGACCAGATCAAGTTGGCCTTGCAGGTCAAAATTCTCAGCTTGTTCATCAGGGTTCACTGAACTATATTAGTTTGCAGGTGCAACCACAACATCTGGTTATACCTTCGATGCAAAGCCATGAATAG 522 0.4923 MSDAPASPSHESGGEQSPRGSSSGAREQDRFLPIANISRIMKKGLPPNGKIAKDAKDTMQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARGGDGSGRPDQVGLAGQNSQLVHQGSLNYISLQVQPQHLVIPSMQSHE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02633 173 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Viun7g02633 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Viun7g02633 173 FunFam Nuclear transcription factor Y subunit B-3 20 144 - -
Viun7g02633 173 Gene3D Histone, subunit A 18 153 IPR009072 GO:0046982
Viun7g02633 173 SUPERFAMILY Histone-fold 28 145 IPR009072 GO:0046982
Viun7g02633 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Viun7g02633 173 MobiDBLite consensus disorder prediction 119 139 - -
Viun7g02633 173 MobiDBLite consensus disorder prediction 1 30 - -
Viun7g02633 173 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Viun7g02633 173 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Viun7g02633 173 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Viun7g02633 173 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02633 Viun-Chr7 30065515 30072698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02633 9 167 CCAAT-HAP3 Transcription Factor Family AT2G37060 75.000 1.49e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Viun7g02633 CBFD_NFYB_HMF 3.4e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02633 K08065 - gmx:100779577 331.643