Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02621 ATGTATTGGGGAGTTATGGCAGGGAACATGGGGTGGGGTGTGATGGAGGAACAAGGATGGAGGAAGGGTCCTTGGACTGCTGAAGAAGACAGATTGCTCATTCAGTATGTCAGATTGCATGGTGAAGGCAGATGGAACTCTGTTGCAAGACTTGCAGGACTGAAAAGAAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCAGACCTAAAGAAGGGCCAGATAACACCACAAGAAGAAAGCATAATTCAGGAACTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATCGCAAGAAGCTTACCGGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACTCATTTCAAGAAAAAGACTAAGAGTCCTTCTGATGCTGCTGAGAAGGCTAGAATCCGTTCCTCAAGGAGGCAGCAGTTTCAACAGCAACAACTGCAGTTGAAGCATCAGCAGCAGGTTCAGCAGCAGCAGCAACAATTCCAATTCAACTTGGACATAAAAGGGATCATAAACTTGCTTGAAGAAAATGATCACAGAGTGCCTTCTACATCTCAAGAGACACAAGAAATGGCTAACATGTGTCCAAACAGTTCAGAGCAGCAGGGCTATTTCTACTCCATGTTCAATGTGAGTGACAATGTCTCTGCACCAGACTCCTCAAACGAAGAAATTCTCTGGGATGGACTCTGGAACTTGGACGATGTTCTTTGCAATTTCAATGCTACCAGCAAAGCTAGTTTACACAATTTAGTCACTCCTTTCAGTTAA 780 0.4449 MYWGVMAGNMGWGVMEEQGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMANMCPNSSEQQGYFYSMFNVSDNVSAPDSSNEEILWDGLWNLDDVLCNFNATSKASLHNLVTPFS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02621 259 FunFam MYB-related transcription factor 79 123 - -
Viun7g02621 259 CDD SANT 24 69 IPR001005 -
Viun7g02621 259 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Viun7g02621 259 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Viun7g02621 259 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Viun7g02621 259 SMART sant 74 122 IPR001005 -
Viun7g02621 259 SMART sant 21 71 IPR001005 -
Viun7g02621 259 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Viun7g02621 259 Gene3D - 79 123 - -
Viun7g02621 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Viun7g02621 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Viun7g02621 259 CDD SANT 79 120 IPR001005 -
Viun7g02621 259 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 235 IPR044676 GO:0003700|GO:0006355|GO:0043565
Viun7g02621 259 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Viun7g02621 259 FunFam Myb transcription factor 22 74 - -
Viun7g02621 259 Gene3D - 22 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02621 Viun-Chr7 29894594 29896143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02621 17 259 MYB Transcription Factor Family AT3G24310 54.275 5.84e-82 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun7g02621 Myb_DNA-binding 7.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02621 K09422 - gmx:100813935 436.417