Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02602 ATGTTGCAGGATGTTTTTGATCAGCCACTGCCACCAAAGGCCGAACCGCAACAGCAACTCCCCATTGAAGAAATTTCAAGCCCTTTTAGCGCTCGACTTTTCGACTTTTATAACGCTGAACTTTTCTCAGAGGCTCTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGCTATGAGGAGAACTCCTCGTATGCCACAACAAACAAATCTTTAACTGTAGATGTAGAAAATAAATTGAATAGCAATAGCAACACAGTCACCACGCCAACTAGCACTACCACCACCACCAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGATGACCCCCAAGAAGATATGGAAAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCATCTTTCAATGTTCCTCCATTTCTCCCAGTCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCCTCAGGTCCAATTACCAGCATTTTCGGTTGTGGAGGGCTTCTCTCAGTATCCCACTGACCCCGTTGCACCTCCACTTATGGGGGCTCCATTACCTTCTGTATTTGAAGAGGATTGCATATCTTCTGTTCCTTCTTATGTGCCTCTCAACCCTTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCACCATACATGCCTACAGGCCCCCTTACTACTGCCTTATCAACTGATAGTTCTGGATATTTTGGTGGAAACATTCTTCTTGGTTCTGAACTTCAGACACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATGCAGCGGGTGTTTAACCCTCCGGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTAGTTCCCGGGGGTGGTAGTTCTACCACTCTAACACCTGAAATCTCTAACTTAGAGGACTCCTCATTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAAACCAATAGAACTACTAGTAGCAATCATGAAGATGATGACGAAGAAGAAGTAGTTGTGAAGGATGAAGACGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1254 0.4322 MLQDVFDQPLPPKAEPQQQLPIEEISSPFSARLFDFYNAELFSEALPNSEVTSSSNCCYEENSSYATTNKSLTVDVENKLNSNSNTVTTPTSTTTTTNNNTTNSSNLSIIFDDPQEDMENDISASIDFSLSPSFNVPPFLPVTSQQEQFDFSSVQPQVQLPAFSVVEGFSQYPTDPVAPPLMGAPLPSVFEEDCISSVPSYVPLNPSSPCTYLSPGMPPYMPTGPLTTALSTDSSGYFGGNILLGSELQTQELEYQGENGRMYCTDSMQRVFNPPDLQALGTESQQLVPGGGSSTTLTPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEDDDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02602 417 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g02602 417 ProSiteProfiles CCT domain profile. 319 361 IPR010402 GO:0005515
Viun7g02602 417 MobiDBLite consensus disorder prediction 354 376 - -
Viun7g02602 417 MobiDBLite consensus disorder prediction 354 383 - -
Viun7g02602 417 MobiDBLite consensus disorder prediction 81 101 - -
Viun7g02602 417 Pfam CCT motif 319 361 IPR010402 GO:0005515
Viun7g02602 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 44 378 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02602 Viun-Chr7 29803012 29807525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02602 289 368 C2C2-CO-like Transcription Factor Family AT5G24930 37.647 2.15e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun7g02602 CCT 3.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02602 - - gmx:100803778 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02602 7 29803012 29807525 Viun7g02602 7 29803012 29807525 ECH