Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02601 ATGAACGGCAGTTCCAGCGAAAGCAAGACCAGGGAGATGGACGGGCAGCTGGCGGGGCTGGGCTACAAAGTCCGCTCATCGGAGCTCTGTCAAGTGGCTGAGAATATGGAGCGTTTAGAGAACGCCATCAACACTGTCAACTCATCCAGGGACATTTCTCAAGTAGTCTCCGATGCACTCCTCTACGATCCCTCCAACATAGGTTTAGGTTCCTGGGTCGACACGCTTCTCTCCGAGCTCGACCAAACCGTGACGGTGTCGTTGCCCTACGATCTATCTTCGGACCTACCCGATTTGCCCACGGATCCGAACCGCCAACTGGGGATGGTAACCACCGTCGAAGAAGACTCCGGGATAAGACTCGTTCACACGCTCATCACGTGTGCGGATTCCGTGCAACGTGGCGACCTCGCATTCGCGGGCTCCCTAATCGAGAGCATGCAGGCACTGCTGGCTCACGTGAACACCTCCTGCGGCATCGGGAAGGTCGCCGGCTACTTCATCGACGCCTTGCGCCGCCGAATCTCATCTCCGCAGAGCGCAGCGTTCCCAACCTCCCCCTACGAGAACGACGTTCTCTACCACCACTACTACGAGGCCTGCCCCTACCTCAAGTTCGCGCACTTCACTGCGAACCAGGCGATCCTGGAAGCGTTCAACGGCCACGACTGCGTCCACGTCATCGATTTCAACCTGATGCAGGGGCTCCAGTGGCCGGCTCTCATACAAGCGCTAGCACTCCGCCCGGGAGGTCCGCCGTCGCTGAGGCTCACCGGCGTGGGAACTCCCTCGCCGGACGAGCGAGACACACTGCGCGAGATCGGCGCAAGGCTGGCGGAGCTGGCGCACTCGGTGAACGTGCGGTTCACCTTCCGCGGAGTGGCAGCGTGGCGGCTGGAGGACGTGAAGCCGTGGATGCTGCAGGTGAGTCCGAAGGAGGCGGTGGCAGTGAACTCGATCATGCAGCTACACCGCGTGCTTGGTTCGGGAATCGATGCGGTTCTAGGCTGGATCCGAAGTCTAAACCCTAAGATCGTGACGGTTGTGGAGCAGGAAGCGAACCACAACGGGGAAGGGTTTCTGGAGCGGTTCACGGAGGCTCTGCACTACTACTCCACCGTGTTCGACTCGCTGGAAGCGTGTTCGGTGGAGCCGGACAAGGGTCTCGCCGAGATGTACCTGCAGAGGGAGATTTGCAACGTGGTGTGCTGTGAGGGACCGGCGCGACTGGAGCGGCACGAGCCGCTGGCGAAATGGAGGGAGCGGCTGGCTAAAGCCGGGTTCAGGCCCTTGCATTTGGGTTCGAACGCTTACAAACAAGCCAGCATGCTGTTGACTCTGTTCTCAGCCGAGGGTTACTGCGTGGAAGAGAATCAAGGGTGTTTGACTCTGGGTTGGCATAGCCGGCCCCTGATTGCGGCTTCGGCTTGGCAAGCCGCGCCGCTAAGAGAGGGTGAAACGGTGCGTTTCCAGCGCTGA 1479 0.6024 MNGSSSESKTREMDGQLAGLGYKVRSSELCQVAENMERLENAINTVNSSRDISQVVSDALLYDPSNIGLGSWVDTLLSELDQTVTVSLPYDLSSDLPDLPTDPNRQLGMVTTVEEDSGIRLVHTLITCADSVQRGDLAFAGSLIESMQALLAHVNTSCGIGKVAGYFIDALRRRISSPQSAAFPTSPYENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPSLRLTGVGTPSPDERDTLREIGARLAELAHSVNVRFTFRGVAAWRLEDVKPWMLQVSPKEAVAVNSIMQLHRVLGSGIDAVLGWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLEACSVEPDKGLAEMYLQREICNVVCCEGPARLERHEPLAKWRERLAKAGFRPLHLGSNAYKQASMLLTLFSAEGYCVEENQGCLTLGWHSRPLIAASAWQAAPLREGETVRFQR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02601 492 SMART DELLA_2 14 90 - -
Viun7g02601 492 Pfam Transcriptional regulator DELLA protein N terminal 14 83 IPR021914 -
Viun7g02601 492 Pfam GRAS domain family 121 478 IPR005202 -
Viun7g02601 492 Gene3D - 12 80 IPR038088 -
Viun7g02601 492 ProSiteProfiles GRAS family profile. 112 478 IPR005202 -
Viun7g02601 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 474 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02601 Viun-Chr7 29800525 29802693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02601 5 478 GRAS Transcription Factor Family AT1G14920 46.641 9.70e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun7g02601 GRAS 1.4e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02601 K14494 - gmx:100803245 778.089