Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02573 CCTGAATTAATCTTTGCAGTAACAGTAACTCTGGCAAATCCTTGGTGGACAGGTCAGGGAGGGTTATCTGGGGTTGACCCAGGAACCCATTCACCTGGCCTAAGCAAACGCCACACCGACCTTGCAATCAATGAAACCAGTGGTGTCCATAATATAGAAGAAGATGAAGACAATAGAGATGAACCGAGAGAGGGTGCAGTTGAGGTTGGAACCCGCAGACCGAGAGGAAGACCTCCCGGATCCAAAAACAAGCCAAAACCACCCATTTTTGTAACAAGGGACAGTCCAAACGCCCTGAGGAGCCATGTGATGGAGATAACCGGAGGAGCTGATGTTGCCGAAAGTGTAGCCCAATTTGCAAGAAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGGAGTGGCTCAGTGGCCAATGTTACTCTTAGACAACCTGCGGCTCCTGGAGCTGTGGTGGCACTTCATGGGAGGTTTGAGATTTTGTCCCTCACCGGGACTTTCTTACCTGGTCCTGCTCCTCCGGGATCTACAGGACTCACGGTGTATCTTGCTGGAGGACAGGGCCAAGTACTAGGAGGGAGTGTGGTTGGGCCTCTAGTTGCGACAGGACCAGTGATGGTGATTGCTGCAACTTTTTCTAATGCAACATATGAGAGACTTCCACTCGATGAAGATGATGAAGGGCCTAGTTCCGCCGCTGCGGTACAAGGAGGAGGATCGCCACCACCGCCACTTGGAATTGGAAGCGGTGGGGGTGCGCAGTTGCAGGGTGGGATCCCAGATCCATCATCTTTGCCTTTGTATAATCTTCCACCAAATGGAGGAGTGGGTCAAGTGGGGCACGAAGCCCTTGCTTGGGCTCATGGACGAGCACCTTTCTGA 879 0.5267 PELIFAVTVTLANPWWTGQGGLSGVDPGTHSPGLSKRHTDLAINETSGVHNIEEDEDNRDEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVLGGSVVGPLVATGPVMVIAATFSNATYERLPLDEDDEGPSSAAAVQGGGSPPPPLGIGSGGGAQLQGGIPDPSSLPLYNLPPNGGVGQVGHEALAWAHGRAPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02573 292 CDD DUF296 100 211 IPR005175 -
Viun7g02573 292 FunFam AT-hook motif nuclear-localized protein 99 226 - -
Viun7g02573 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 224 - -
Viun7g02573 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 287 IPR014476 GO:0003680
Viun7g02573 292 MobiDBLite consensus disorder prediction 49 71 - -
Viun7g02573 292 MobiDBLite consensus disorder prediction 16 96 - -
Viun7g02573 292 Gene3D - 99 226 - -
Viun7g02573 292 ProSiteProfiles PPC domain profile profile. 96 233 IPR005175 -
Viun7g02573 292 MobiDBLite consensus disorder prediction 220 269 - -
Viun7g02573 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02573 Viun-Chr7 29612994 29614003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02573 11 292 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.751 1.19e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02573 - - var:108341460 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02573 7 29612994 29614003 Viun7g02573 7 29612994 29614003 ECH