Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02560 ATGGATGAGGAAGGATCAAGGGGAAAAACCAAGGACGACGGCGGAGATGTCCGTTACCGGGGGGTTCGGCGGCGGCCCTGGGGGAAGTTCGCGGCGGAGATTCGAGACTCCACCCGGCAAGGCCAGAGGGTGTGGCTCGGAACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGATAGATCTGCTTATGCCATGAGAGGTCCATTTGCAATCCTGAACTTCCCTGAGGAGTACCCTATGACTGCTGGTGGTGCCACTAATGCCGCCACCCATTCCTCCGTCGCTTCATCCTCCTCATCCTCTTCTTCTAGGCATGCAAATGCGGAACCCAGAGCAAGAAGTGACCAAGGAACACAGGTGTTTGAGTTCGAGTACTTAGACGACAAATTGTTGGAGGAGCTTCTAGACTTTGAGGACAAAAAGAAAAGGGGCCCCTGA 441 0.5488 MDEEGSRGKTKDDGGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRSAYAMRGPFAILNFPEEYPMTAGGATNAATHSSVASSSSSSSSRHANAEPRARSDQGTQVFEFEYLDDKLLEELLDFEDKKKRGP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02560 146 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Viun7g02560 146 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Viun7g02560 146 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Viun7g02560 146 PANTHER DNA-BINDING DOMAIN 13 141 IPR044808 GO:0003700|GO:0009873
Viun7g02560 146 MobiDBLite consensus disorder prediction 1 22 - -
Viun7g02560 146 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Viun7g02560 146 MobiDBLite consensus disorder prediction 86 108 - -
Viun7g02560 146 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Viun7g02560 146 MobiDBLite consensus disorder prediction 81 120 - -
Viun7g02560 146 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Viun7g02560 146 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Viun7g02560 146 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Viun7g02560 146 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02560 Viun-Chr7 29503433 29504183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02560 13 143 AP2-EREBP Transcription Factor Family AT3G23230 59.091 3.98e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g02560 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02560 - - gmx:100775830 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02560 7 29503433 29504183 Viun7g02560 7 29503433 29504183 ECH