Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02559 ATGGAGGAGAACCAGAAGGGGAAGCAGGGCAAGGAAGAAGTGCGGTACCGTGGCGTGCGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGATCCGTCGAAGCAAGGGTCGAGGCTGTGGTTGGGGACATTTGACACCGCTGAAGAAGCTGCTAGAGCTTATGATCGCGCAGCGTTTAACTTGAGGGGTCATCTTGCTATTCTGAATTTTCCTAGTGAGTACTATTCTCAAATAAGGGGTTCACCACCTTATCCACCTCATTTAGCACCACCCTCTTCCTCCTCTTCTCACGGTGGTGGAAGCGCTTCTTCTTCTGGCGCATATCATAGGCCTGTTTTCGAGATTCCTTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCAGTCAGAGGAGCACAAGAAGAAAAAGAAGGGAGAATAG 429 0.5175 MEENQKGKQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLAPPSSSSSHGGGSASSSGAYHRPVFEIPCLDDKVLEDLLGQSEEHKKKKKGE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02559 142 PANTHER DNA-BINDING DOMAIN 7 111 IPR044808 GO:0003700|GO:0009873
Viun7g02559 142 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Viun7g02559 142 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Viun7g02559 142 FunFam Ethylene-responsive transcription factor 2 14 75 - -
Viun7g02559 142 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Viun7g02559 142 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Viun7g02559 142 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Viun7g02559 142 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Viun7g02559 142 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Viun7g02559 142 MobiDBLite consensus disorder prediction 81 109 - -
Viun7g02559 142 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02559 Viun-Chr7 29489870 29490756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02559 13 137 AP2-EREBP Transcription Factor Family AT3G23230 67.200 7.67e-48 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g02559 AP2 5.3e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02559 - - gmx:100776376 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02559 7 29489870 29490756 Viun7g02559 7 29489870 29490756 ECH