Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02543 ATGGAACGTGCGGTTCTTGATGGTATCATCAATAGGCTGCTCGAAGTCAGAGGCAGGCCCGGCAAACAGGTGCAACTTTCTGAGCCTGAAATCAAGCAGCTTTGTCTTGTCTCCAGGGATATCTTCTCCAACCAGCCCAACCTCTTGGAACTCGAGGCACCCCTCAAGATCTGTGGAGATATCCATGGTCAATATTCTGACCTTCTGCGACTTTTTGACTACGGTGGATTGCCTCCTCGTTCTAATTACTTATTTCTAGGGGACTATGTTGATCGTGGGAAGCAAAGTTTGGAGACTATATGTCTCCTTCTGGCTTATAAAATAAAATATCCTAATAACTTCTTTCTTCTGAGGGGCAACCATGAATGTGCTTCAATAAACCGAATCTATGGATTTTATGATGAGTGTAAACGAAGATTCAATGTGAGGCTTTGGAAAGTGTTCACAGAATGTTTCAACTGCTTGCCAGTGGCAGCTCTCATTGATGAAAAAATACTCTGCATGCATGGTGGACTCTCTCCTGACTTACACTATTTAAATCAGATCAAGAGTTTGCCGCGTCCTACGGAAGTACCTGAAACCGGTCTCCTATGTGACCTTCTTTGGTCTGATCCTAGCAGTGACATTCGGGGTTGGGGAGAAAATGAACGTGGAGTTTCCTACACTTTTGGTGTTGACAGGGTCACCGAATTCCTTCAGAAGCATGATCTTGATTTGATTTGCAGGGCCCATCAGGTTGTGGAAGACGGTTATGAATTCTTTGCTGACAGACAACTTGTGACTATCTTCTCGGCTCCTAATTACTGTGGAGAGTTTGACAATGCTGGTGCAATGATGACTGTTGATGAATCACTCGTCTGCTCTTTTCAAATATTGAAGCCTGTAGATAAAAAACCTAACAAGTTTCGCTTTGGGAGCACAACTACAGTTAAGCCTACTACTCCAACAAAAGCCAAGTCATTTTTTGGTGCTAAAGCTTGA 981 0.4353 MERAVLDGIINRLLEVRGRPGKQVQLSEPEIKQLCLVSRDIFSNQPNLLELEAPLKICGDIHGQYSDLLRLFDYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPNNFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTECFNCLPVAALIDEKILCMHGGLSPDLHYLNQIKSLPRPTEVPETGLLCDLLWSDPSSDIRGWGENERGVSYTFGVDRVTEFLQKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMTVDESLVCSFQILKPVDKKPNKFRFGSTTTVKPTTPTKAKSFFGAKA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02543 326 Gene3D - 1 305 IPR029052 -
Viun7g02543 326 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 299 - -
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Viun7g02543 326 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Viun7g02543 326 SMART pp2a_7 26 296 IPR006186 GO:0016787
Viun7g02543 326 CDD MPP_PP1_PPKL 5 294 - -
Viun7g02543 326 SUPERFAMILY Metallo-dependent phosphatases 18 302 IPR029052 -
Viun7g02543 326 FunFam Serine/threonine-protein phosphatase 52 306 - -
Viun7g02543 326 Pfam Calcineurin-like phosphoesterase 56 246 IPR004843 GO:0016787
Viun7g02543 326 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Viun7g02543 326 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02543 Viun-Chr7 29268058 29271860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02543 33 239 Calmodulin-binding Proteins AT5G63870 31.452 6.59e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02543 K06269 - gmx:100791655 620.928