Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02511 ATGGAAAATCCCATGACAAAACGCCAAAATCACACTCTCTCTTCATACAAAACCGCTACTCTTCTAAACAGTTTTACCCAACGTTTTCTTCTTGTCTTTATATCTCACACCTTTCTTACACATCCCTTTCTCAATATAAACCCCTCGCATCTTGCAATTCTCTTTAAGCTTAAGAGATTCACAAAGATCAACACTGCTATGAATTCAGAGAAGCCAGTCAGCCCTGAGAATTTAAGTGATGAAAATGATGAAGAAGAAGCACAAGATGACAGTGGTGGAACCAAACGCTCTTATGAGTGCACATTCTGCAAAAGAGGCTTCACAAACGCTCAGGCTTTGGGGGGTCATATGAATATCCATAGGAAAGACAGGGCCAGGGCCAAGCAATTCACACTTGAAGCTTCACCTTCAATTAACAAATTCAACACTGATGAATCCATAGTCTTTCCTTTTGCCTCACAAACTTTAAACCAACCCGCAAGGTCTAATTACTCCATTTTGGAGTCCCAGAGGAACTGTGACAGACACTTTCATCCACCACCACCTGCAAGTGCCTTTTATTACGACTTTTATGACCCAAGGTCTCGGTCTTTGAGTTTCAACCAAGAGCTTCGCGGTGCCAACCTCAGTCTCCAAATTGGTCCAAGTCATCATGTGGGTGATGATATTCATCAAGTCAGAGGAAACCAGAAAGATAGTGAAGTGGACTTGGAGCTCAGACTTGGACATCATCCATAA 738 0.4228 MENPMTKRQNHTLSSYKTATLLNSFTQRFLLVFISHTFLTHPFLNINPSHLAILFKLKRFTKINTAMNSEKPVSPENLSDENDEEEAQDDSGGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRARAKQFTLEASPSINKFNTDESIVFPFASQTLNQPARSNYSILESQRNCDRHFHPPPPASAFYYDFYDPRSRSLSFNQELRGANLSLQIGPSHHVGDDIHQVRGNQKDSEVDLELRLGHHP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02511 245 PANTHER OS07G0101800 PROTEIN 79 244 - -
Viun7g02511 245 SMART c2h2final6 98 120 IPR013087 -
Viun7g02511 245 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Viun7g02511 245 Gene3D Classic Zinc Finger 75 147 - -
Viun7g02511 245 MobiDBLite consensus disorder prediction 68 95 - -
Viun7g02511 245 Pfam C2H2-type zinc finger 98 122 - -
Viun7g02511 245 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Viun7g02511 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02511 Viun-Chr7 29023610 29024347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02511 89 243 C2H2 Transcription Factor Family AT3G09290 35.443 4.51e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun7g02511 zf-C2H2_6 2.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02511 - - vun:114191365 505.753