Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02485 ATGCCTTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCTCGTCAACTACGGCAAGGAATATGGGAAGCTCGTCGTCATCGTCGACGTCATTGACCAGAACAGAGCACTTGTCGATGCCCCAGATATGGTGAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGATATTAAGATTGACATTAAGAGGGTCCCCAAGAAGAAAGATCTTGTTAAAGCCATGGAGGCTGCTGATGTTAAGAACAAATGGGAGAACAGCTCATGGGGCAGGAAACTCATTGTCAAAAAGAGAAGGGCAGCCCTCACTGACTTCGACAGGTTCAAGCTAATGTTGGCCAAGATTAAGAGGGCAGCTGTTGTAAGGCAAGAACTCTCTAAGCTGAAAAAGAGCGCGTAG 399 0.4737 MPFKRYVEIGRVALVNYGKEYGKLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWENSSWGRKLIVKKRRAALTDFDRFKLMLAKIKRAAVVRQELSKLKKSA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02485 132 Gene3D - 1 84 IPR014722 -
Viun7g02485 132 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Viun7g02485 132 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Viun7g02485 132 FunFam 60S ribosomal protein L14-1 1 84 - -
Viun7g02485 132 Gene3D - 92 127 - -
Viun7g02485 132 PANTHER 60S RIBOSOMAL PROTEIN L14 1 131 IPR039660 GO:0003723|GO:0003735
Viun7g02485 132 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02485 Viun-Chr7 28842142 28843385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02485 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.443 2.32e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02485 K02875 - gmx:100499889 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02485 7 28842142 28843385 Viun7g02485 7 28842142 28843385 ECH