Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02484 ATGGGATTCTATCTTAATCTCAAATTCAAGGCGTTTCGGCTGAAACGGTTTCTGCTTGGACGTGGAGGCAGAAAAAGAAAGCACAAGGTGGCAAAGAAGCCCTCATGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATGATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATCTTTGATGCACTTATTGGAGATAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGAGTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCTTGGAGTAAGAGCAAAGATCAGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATACTGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGTACATACCGAAGATTAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGAAATGCAGCAGGTGCAAAACATTATAGAGGTTCCGATTTTGTGGTTAGAAGTGAAGTGCTTGATTCTGGTACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCTCAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGAGTGA 822 0.4124 MGFYLNLKFKAFRLKRFLLGRGGRKRKHKVAKKPSWMMPMTYGYHVVEHDMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQESRLSSKSKEALKRAYLGVRAKIREEHKLEETCRMGSASVILINGEKLVVANMGDYRTVVCRDGIAHQTTGTYRRLEKMHWSRRLFAGNAAGAKHYRGSDFVVRSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02484 273 ProSiteProfiles PPM-type phosphatase domain profile. 58 272 IPR001932 -
Viun7g02484 273 Gene3D - 44 273 IPR036457 -
Viun7g02484 273 Pfam Protein phosphatase 2C 72 173 IPR001932 -
Viun7g02484 273 Pfam Protein phosphatase 2C 212 265 IPR001932 -
Viun7g02484 273 SUPERFAMILY PP2C-like 50 272 IPR036457 -
Viun7g02484 273 PANTHER PROTEIN PHOSPHATASE 38 272 IPR015655 GO:0004722|GO:0006470
Viun7g02484 273 SMART PP2C_4 51 270 IPR001932 -
Viun7g02484 273 CDD PP2Cc 78 272 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02484 Viun-Chr7 28827117 28829251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02484 1 272 PP2C-type Phosphatase Gene Family AT3G23360 45.878 4.79e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02484 K19704 - gmx:100785227 416.772