Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02483 ATGGGATTCTATCTTAATCTCAAATTCAAGGCGTTTCGGCTGAAACGGTTTCTGCTTGGACGTGGAGGCAGAAAAAGAAAGCACAAGGTGGCAAAGAAGCCCTCATGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATGATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATCTTTGATGCACTTATTGGAGATAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGAGTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCTTGGAGTAAGAGCAAAGATCAGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATACTGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGTACATACCGAAGATTAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGATTCATGCTAGGACGTGGATCAGGAAATGCAGCAGGTGCAAAACATTATAGAGGTTCCGATTTTGTGGTTAGAAGTGAAGTGCTTGATTCTGGTACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCTCAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGAGTGA 846 0.4149 MGFYLNLKFKAFRLKRFLLGRGGRKRKHKVAKKPSWMMPMTYGYHVVEHDMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQESRLSSKSKEALKRAYLGVRAKIREEHKLEETCRMGSASVILINGEKLVVANMGDYRTVVCRDGIAHQTTGTYRRLEKMHWSRRLFAGFMLGRGSGNAAGAKHYRGSDFVVRSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFE 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02483 281 Gene3D - 44 281 IPR036457 -
Viun7g02483 281 CDD PP2Cc 78 280 IPR001932 -
Viun7g02483 281 SMART PP2C_4 51 278 IPR001932 -
Viun7g02483 281 SUPERFAMILY PP2C-like 50 280 IPR036457 -
Viun7g02483 281 PANTHER PROTEIN PHOSPHATASE 38 280 IPR015655 GO:0004722|GO:0006470
Viun7g02483 281 Pfam Protein phosphatase 2C 220 273 IPR001932 -
Viun7g02483 281 Pfam Protein phosphatase 2C 72 173 IPR001932 -
Viun7g02483 281 ProSiteProfiles PPM-type phosphatase domain profile. 58 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02483 Viun-Chr7 28826771 28829246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02483 1 280 PP2C-type Phosphatase Gene Family AT3G23360 45.230 3.17e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02483 K19704 - gmx:100785227 417.542