Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02482 ATGGGATTCTATCTTAATCTCAAATTCAAGGCGTTTCGGCTGAAACGGTTTCTGCTTGGACGTGGAGGCAGAAAAAGAAAGCACAAGGTGGCAAAGAAGCCCTCATGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATGATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATCTTTGATGCACTTATTGGAGATAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGAGTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCTTGGAGTAAGAGCAAAGATCAGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATACTGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGTACATACCGAAGATTAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGACGTGGATCAGGAAATGCAGCAGGTGCAAAACATTATAGAGGTTCCGATTTTGTGGTTAGAAGTGAAGTGCTTGATTCTGGTACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCTCAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGAGTGA 834 0.4149 MGFYLNLKFKAFRLKRFLLGRGGRKRKHKVAKKPSWMMPMTYGYHVVEHDMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQESRLSSKSKEALKRAYLGVRAKIREEHKLEETCRMGSASVILINGEKLVVANMGDYRTVVCRDGIAHQTTGTYRRLEKMHWSRRLFAGRGSGNAAGAKHYRGSDFVVRSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02482 277 SMART PP2C_4 51 274 IPR001932 -
Viun7g02482 277 ProSiteProfiles PPM-type phosphatase domain profile. 58 276 IPR001932 -
Viun7g02482 277 Pfam Protein phosphatase 2C 72 173 IPR001932 -
Viun7g02482 277 Pfam Protein phosphatase 2C 216 269 IPR001932 -
Viun7g02482 277 Gene3D - 44 277 IPR036457 -
Viun7g02482 277 CDD PP2Cc 78 276 IPR001932 -
Viun7g02482 277 SUPERFAMILY PP2C-like 50 276 IPR036457 -
Viun7g02482 277 PANTHER PROTEIN PHOSPHATASE 38 276 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02482 Viun-Chr7 28826771 28829248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02482 1 276 PP2C-type Phosphatase Gene Family AT3G23360 45.878 2.40e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02482 K19704 - gmx:100785227 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02482 7 28826771 28829248 Viun7g02482 7 28826771 28829248 ECH