Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02470 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGTAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACCTAGGTGTTAATGTACAAAGTGGGGAGGAAGTCGCTGTTAAGCTAGAATCTGTGAAGACCAAGCATCCCCAGCTTCACTATGAGTCTAAATTATATATGCTTCTCCAAGGAGGAACTGGTATACCCCATCTAAAATGGTTTGGAATTGAGGGTGACTACAATGTCATGGCTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGTAATAGGAAATTATCTCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTCCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGGAAGGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTACCGGGATCTTCAAACACATAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCTCGTTATGCAAGTGTTAATACTCATTTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAAAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTATTATGCAAGTCCTATCCATCGGAATTCACATCATACTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAGCCCGATTACTCTTATCTGAAGAGACTCTTTCGGGACCTATTCATCCGAGAAGGGTATCAGTTTGACTATGTTTTTGACTGGACAATGTTGAAGTATCCACAAATCGGATCCAGCTCTAGAGCTCGACCAAGTGGGAAGCCAGTCATAAACCCAGGGCAATCAGGAGAACGACCTTCAGGTGTATCAGAGATTCGAGATAGATTCTCAGGTGCAGTTGAGGCATTTGCGAGGAGGAATGGCTCTGGACTTGGTCTGCATGGTGATCATTCTAGGCATAAGTCTTCTGATGATGCGCCTTCTTCGTCAAAAGATGTGCAAGCTGATTCTGAGAGGCCTCGGAGTTCTTCTCGTAATGGCAGTTCTTCAAAGAAGCTTGTCTTGTCAAGCAGCCGACCAAGCTCTTCCGGCGAGCCCAGTGAAAGCCGTGTTAGCCGACTGGTCTCAAGCAGTGGCAGACTATCAACAACTCAGAGACTTCAACCTGCTTCCGAGTCTAAAACATCTCTAACTCGGACTTCGGGGACAAGACTTGGCCGTGATGATGCCCTCAGGAGCTTTGAACTCCTGTCACTTAGTACAGGGAAAAGGAAATGA 1383 0.4389 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGIEGDYNVMAIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERPSGVSEIRDRFSGAVEAFARRNGSGLGLHGDHSRHKSSDDAPSSSKDVQADSERPRSSSRNGSSSKKLVLSSSRPSSSGEPSESRVSRLVSSSGRLSTTQRLQPASESKTSLTRTSGTRLGRDDALRSFELLSLSTGKRK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02470 460 CDD STKc_CK1_delta_epsilon 8 282 - -
Viun7g02470 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Viun7g02470 460 Gene3D Transferase(Phosphotransferase) domain 1 1 321 - -
Viun7g02470 460 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Viun7g02470 460 MobiDBLite consensus disorder prediction 375 438 - -
Viun7g02470 460 SMART serkin_6 9 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02470 460 MobiDBLite consensus disorder prediction 347 374 - -
Viun7g02470 460 FunFam Putative Casein kinase I 1 85 - -
Viun7g02470 460 MobiDBLite consensus disorder prediction 342 439 - -
Viun7g02470 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Viun7g02470 460 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02470 460 PANTHER CASEIN KINASE-RELATED 9 396 - -
Viun7g02470 460 MobiDBLite consensus disorder prediction 299 324 - -
Viun7g02470 460 FunFam Casein kinase 1-like protein 1 328 - -
Viun7g02470 460 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02470 Viun-Chr7 28756629 28763152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02470 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 1.66e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Viun7g02470 Pkinase 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02470 K08960 - qsu:112030604 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02470 7 28756629 28763152 Viun7g02470 7 28756629 28763152 ECH