Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02448 ATGGCAACTATGCTGGCAAAGGACCATGCTCTCAACCTCAAGGAGACTGAGCTTTGCCTCGGTCTGCCTGGTGCTGGCGGCGGTGGCGGTGGCGGCGGGGGCGGCGGCGGCTCTGAGGTGGAAACACCAAGGGCTACTGGGAAGAGAGGGTTCTCTGAGACCGTTGATCTGAAGCTTAATCTTCAGGCCAAGGAAGATCTCAACGACAATCTGAAGAATGCCTCAGAGGAGAAGACCCTCCTTAAGGATCCTACTAAGCAACCGGCTAAGGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGAAAGAACATGATGAGCCAGAAGGTTAGCAGTGAGGAGGGAGCTGAGAAGACAACAAGCAGCACTGGTTCTGGGGCATTTGTGAAGGTTTCCATGGACGGAGCTCCTTATCTTCGCAAGGTGGACCTCACAATGTACAAAAGCTACAAAGACTTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAATTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGCGCAAGTTGATGGATCTTCTTAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTGGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGTCTACGAATAATGAAAGGATCAGAGGCAATTGGACTTGCGCCAAGAGCAATGGAAAAATGCAAAAGCAGAAGCTGA 738 0.5054 MATMLAKDHALNLKETELCLGLPGAGGGGGGGGGGGGSEVETPRATGKRGFSETVDLKLNLQAKEDLNDNLKNASEEKTLLKDPTKQPAKAQVVGWPPVRSYRKNMMSQKVSSEEGAEKTTSSTGSGAFVKVSMDGAPYLRKVDLTMYKSYKDLSDALAKMFSSFTMGNYGAQGMIDFMNERKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02448 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 232 IPR003311 GO:0005634|GO:0006355
Viun7g02448 245 Coils Coil 57 77 - -
Viun7g02448 245 FunFam Auxin-responsive protein 122 237 - -
Viun7g02448 245 SUPERFAMILY CAD & PB1 domains 122 226 - -
Viun7g02448 245 MobiDBLite consensus disorder prediction 24 50 - -
Viun7g02448 245 Pfam AUX/IAA family 45 236 IPR033389 -
Viun7g02448 245 Gene3D - 122 239 - -
Viun7g02448 245 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02448 Viun-Chr7 28590524 28592711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02448 112 235 B3 DNA Binding Superfamily AT4G23980 33.065 3.56e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun7g02448 AUX_IAA 1.5e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02448 K14484 - gmx:100810762 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02448 7 28590524 28592711 Viun7g02448 7 28590524 28592711 ECH