Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02447 ATGGAAAGCACTGTCACATATGAGACTGATCTCAACCTCAAGGCAACTGAGCTCAGATTGGGACTCCCAGGAACAGAAGAAACTCAGGAAAAAACACTGTCTCCAGCTGTTAGAATTACCAACAAAAGGCCATTGACTGAAACTTCTTCTGAGGACACTGTTTCTAATGCTAAAAAAAATGTGGAAACTGAGACACCACCTCCTGCAAAGGCAAAGATAGTGGGGTGGCCACCAATCAGATCTTATAGAAAAAACAGTTTTCAGGAGAATGAGGGTGCTGGGATTTATGTGAAAGTAAGCATGGATGGAGCACCTTATCTTAGGAAGATTGACCTGAAGGTATATGGAGGCTACACACAACTTCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGTGAGTACTCTGAAAAAGAAGGTTACAAAGGATCTGACTATGCACCAACATACGAAGACAAGGACGGTGACTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTGAGAATCATGAAAGGATCAGAGGCAAGGGGTTTAGGTTGTGGTGTATGA 576 0.4271 MESTVTYETDLNLKATELRLGLPGTEETQEKTLSPAVRITNKRPLTETSSEDTVSNAKKNVETETPPPAKAKIVGWPPIRSYRKNSFQENEGAGIYVKVSMDGAPYLRKIDLKVYGGYTQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCGV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02447 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 185 IPR003311 GO:0005634|GO:0006355
Viun7g02447 191 Gene3D - 88 191 - -
Viun7g02447 191 MobiDBLite consensus disorder prediction 27 62 - -
Viun7g02447 191 MobiDBLite consensus disorder prediction 23 69 - -
Viun7g02447 191 FunFam Auxin-responsive protein 89 191 - -
Viun7g02447 191 ProSiteProfiles PB1 domain profile. 94 181 IPR000270 GO:0005515
Viun7g02447 191 Pfam AUX/IAA family 16 188 IPR033389 -
Viun7g02447 191 SUPERFAMILY CAD & PB1 domains 84 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02447 Viun-Chr7 28542841 28544430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02447 97 187 B3 DNA Binding Superfamily AT2G46530 37.363 1.09e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun7g02447 AUX_IAA 1.2e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02447 K14484 - gmx:100527777 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02447 7 28542841 28544430 Viun7g02447 7 28542841 28544430 ECH