Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02419 ATGGCGTTTTCAGTACTGCTACTGTTGTTCTCTCTTGCGTTTTTGCTCTCAAACCCAACATGGGTGTGTGGGAATGGAGAGCTAAGAGCACTGATGGATTTGAAAGCCAGTTTGGATCCAGAGAGCCTTTATCTACCGTCTTGGACTGTCAATGGTGACCCATGTGGTGGATATTTTGAAGGAGTGGCATGCAATGAGAAGGGGCAAGTGGCAAATGTTTCTCTGCAGGGTAAGGGTCTCTCAGGGAAGCTTTCACCAGCCATTGCAGGGCTCAAGCACCTGACTGGTCTCTACTTGCATTATAACTCTTTGTATGGAGGCATACCAAGAGAGATTGCAAACTTGACTCAGCTTGTTGATTTGTATTTGAATGTAAACAATCTGTCTGGGGAAATCCCACGCGAGATAGCCACCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATAACTTGACTGGAAGCATTCCTACACAACTAGGTGCTTTGAAAAAGCTGAGTGTTGTTGCATTGCAGTCAAACCAGTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGGCTTGCTGGCGAGGCTAGATTTGAGCTCTAATAATCTTTTTGGTTCCATTCCCACTAGTCTTGCAGAAGCTCCTTCACTGAGAGTTTTGGATGTTCACAACAACACCCTTTCTGGGAATGTACCTCCTGCTCTTAAGAGACTAGAGGATAGGTTTCTGTATGAGTACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCCTTGAAAGCTTGCAACGCCTCAGATCATGTGATTCCAAGCAGACCCGAGCCTTATGGAGCAGCAACAAGAGATATCCCTGAAACTGCAAATGTGAAGTTACCATGCAATGGTACTCAGTGCCTTAATTCATCAAAATCAAATCAATCCACATCAATTACTGTGGGCATATTTGTGGTAATAATTGCAGTGTCTGCAATCGGTATTTTGACATTCACACTGTATCGTCGGAGAAAACAAAAGCTTGGAGGTTCTTTTCATATCAGTGACAACCGTGAGGAGGCCATGGGTGGTGGTGTGTGTAGGAAAGACGGATCTCCTTTGGTCAGCCTTGAGTACTCTACAGGATGGGACCCTTTGGCTGAGAGTAGAAATTTCAACGGGTATAGTCAAGATATGGTTCAGAGTTTGAGGTTCAATTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTGAATCTGTTGGGGAAGAATAGCTTTAGTGCAACATATAGAGGAGTTCTGAGAGATGGATCCGTTGTTGCAGTGAAGAGCATAAGTAAAACTAGTTGCAAGTCGGATGAAGGTGAGTTTATGAAGGGACTGAACATGTTGACCTCATTGAGGAATGATAATGTAGTTAGGTTGAGGGGATTCTGCTGTTCAAGGGGACGAGGTGAATGCTTTCTGATTTATGATTTTGTTTCCAATGGAAACCTTTCACGCTTCCTTGATGTTAACGAAGGAGATGGTGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGGTTGCAAAAGGTATGGCATATTTACATGCATACAGAGGAAACAAACCAGTTTTGATTCACCAGAACATCTCAGCTGACAAAGTCCTGATTGATCAGCGGTTCAATCCATTGTTGGCAGATTGTGGCATTTACAAGCTTCTTACTAATGATATTGTGTTCTCTGCACTGAAGGGTAGTGCAGCAAAGGGTTACTTGGGTCCTGAATATGCCACTACTGGGCGCCTTGCTCAGACAAGTGATGTCTATGCCTTTGGGGTGCTGCTTTTCCAGATCCTTTCTGGGAAGCAAGAAATCACTAGCTCAATAAGGGTTGCTGCAGAGTGCTCCAAGTTCCAAGAATTTATGGACCCGAATCTTCATGGAAGATACTTTGAATATGAAGCAGCTAAACTGGCAAAAATAGCTTTGCTTTGCTCCCATGACTCTCCCTTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTGGGGAACTGCAGTAGCTGCCTCTGA 2031 0.4397 MAFSVLLLLFSLAFLLSNPTWVCGNGELRALMDLKASLDPESLYLPSWTVNGDPCGGYFEGVACNEKGQVANVSLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGGIPREIANLTQLVDLYLNVNNLSGEIPREIATMENLQVLQLCYNNLTGSIPTQLGALKKLSVVALQSNQLTGAIPASLGDLGLLARLDLSSNNLFGSIPTSLAEAPSLRVLDVHNNTLSGNVPPALKRLEDRFLYEYNLGLCGVGFSSLKACNASDHVIPSRPEPYGAATRDIPETANVKLPCNGTQCLNSSKSNQSTSITVGIFVVIIAVSAIGILTFTLYRRRKQKLGGSFHISDNREEAMGGGVCRKDGSPLVSLEYSTGWDPLAESRNFNGYSQDMVQSLRFNLEEVESATQYFSELNLLGKNSFSATYRGVLRDGSVVAVKSISKTSCKSDEGEFMKGLNMLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVSNGNLSRFLDVNEGDGEVLEWSTRVSIVKGVAKGMAYLHAYRGNKPVLIHQNISADKVLIDQRFNPLLADCGIYKLLTNDIVFSALKGSAAKGYLGPEYATTGRLAQTSDVYAFGVLLFQILSGKQEITSSIRVAAECSKFQEFMDPNLHGRYFEYEAAKLAKIALLCSHDSPFERPSMEAIVQELGNCSSCL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02419 676 FunFam Protein NSP-INTERACTING KINASE 2 483 673 - -
Viun7g02419 676 Pfam Protein tyrosine and serine/threonine kinase 408 669 IPR001245 GO:0004672|GO:0006468
Viun7g02419 676 SUPERFAMILY L domain-like 23 234 - -
Viun7g02419 676 Gene3D Transferase(Phosphotransferase) domain 1 483 675 - -
Viun7g02419 676 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Viun7g02419 676 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Viun7g02419 676 ProSiteProfiles Protein kinase domain profile. 404 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02419 676 SUPERFAMILY Protein kinase-like (PK-like) 379 669 IPR011009 -
Viun7g02419 676 FunFam Protein NSP-INTERACTING KINASE 2 375 482 - -
Viun7g02419 676 Gene3D Phosphorylase Kinase; domain 1 373 482 - -
Viun7g02419 676 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Viun7g02419 676 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 670 - -
Viun7g02419 676 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Viun7g02419 676 Gene3D Ribonuclease Inhibitor 21 306 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02419 Viun-Chr7 28227069 28230256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02419 8 517 Miscellaneous Gene Families AT4G22730 55.153 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Viun7g02419 PK_Tyr_Ser-Thr 4.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02419 - - gmx:100775422 1197.19