Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02418 ATGGCTTCTCTGGCGGTTTCCACCGTGGCTGTGTCAGAAATGCTTGGAAACCCCGTCAGCCTCAGAGGCGCCACCAGGTCTGCTCCGTCACCATCTACACCTGTTACCTTCAAGACTGTTGCTCTTTTCTCCAAGAAGAAGGCGGCGCCACCTCCTCCAAAGAAAAAGGCTGCTGCTGTGTCCCCCGCCAACGAGGAACTCGCCAAGTGGTATGGTCCTGATAGAAGGATCTTCTTGCCGGAGGGTCTCTTGGACCGATCAGAGATCCCGGAGTACTTGACAGGAGAAGTTCCCGGAGATTATGGGTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATACCAGGCGTTTGAGTTGATTCATGCGAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAACCAATCCCCATCAATCTTATTGTTGCTGTTGTTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATTATCAATGGCCTGGATTTTGAAGACAAGCTTCACCCAGGTGGTCCATTCGACCCGTTGGGGCTAGCAAAGGATCCAGACCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCGATGCTCGGTTTCTACTTCCAAGCTTATGTGACTGGAGAAGGCCCGGTTGAGAACTTGGCAAAACATCTTAGTGACCCTTTTGGTAACAACTTGCTCACTGTGCTTGCTGGATCAGCTGAGAGGGTTCCAACTCTGTAA 867 0.5006 MASLAVSTVAVSEMLGNPVSLRGATRSAPSPSTPVTFKTVALFSKKKAAPPPPKKKAAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLVGGAEYYRIINGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVLAGSAERVPTL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02418 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Viun7g02418 288 SUPERFAMILY Chlorophyll a-b binding protein 69 279 - -
Viun7g02418 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Viun7g02418 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 285 IPR001344 GO:0009765|GO:0016020
Viun7g02418 288 FunFam Chlorophyll a-b binding protein, chloroplastic 77 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02418 Viun-Chr7 28219546 28221481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02418 6 288 Chloroplast and Mitochondria Gene Families AT4G10340 80.986 2.26e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02418 K08916 - gmx:100817348 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02418 7 28219546 28221481 Viun7g02418 7 28219546 28221481 ECH
Viun4g02380 4 39242597 39245136 Viun7g02418 7 28219546 28221481 PCT