Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02406 ATGGAGTCAAACAATTTGCATAGTGATCAAAGGGCAGATAAAAAGAAAATAAGATACACGGAATGTCTGAAGAACCATGCAGCTGCAATTGGTGGCAATGCAACTGATGGGTGTGGCGAGTTCATTGCTGATGGAGAAGAAGGAACGCTTGAGGCTCTCAGATGCTCGGCTTGTAACTGCCACAGAAACTTCCACAGAAAAGAGATAGAGTCTTCTGATTCCTATTCCAATCCTCTGATGATTGTTCCTGACACTACTCAGATAGTGCCCATTTTGGCTCAGTTATCTCCTCACAAAAGTGGTTCAATTAGTCCTTCTGATGTGTCTGATGAGAAGGACTGTGAAGACGGGGTGACAAAGGAGGAGGGAAATAATGCAACTGAAAAGGTGAAGAAGAGGTTTAGAACCAAGTTCACACAAGAACAAAAGGAGAAGATGTTCGTTTTTGCAGAAAGAGCAGGGTGGAGAATACAGAAGCTAGATGAATCTGTGGTGCAGAAGTTTTGCCAAGAGATTGGAATCAAAAGAAGAGTCCTCAAAGTGTGGATTCACAATAACAAGAACACTTTTGCCAAGAGAAATCCCTCCACTAGCTAG 597 0.4271 MESNNLHSDQRADKKKIRYTECLKNHAAAIGGNATDGCGEFIADGEEGTLEALRCSACNCHRNFHRKEIESSDSYSNPLMIVPDTTQIVPILAQLSPHKSGSISPSDVSDEKDCEDGVTKEEGNNATEKVKKRFRTKFTQEQKEKMFVFAERAGWRIQKLDESVVQKFCQEIGIKRRVLKVWIHNNKNTFAKRNPSTS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02406 198 MobiDBLite consensus disorder prediction 96 125 - -
Viun7g02406 198 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 189 - -
Viun7g02406 198 MobiDBLite consensus disorder prediction 105 125 - -
Viun7g02406 198 Pfam ZF-HD protein dimerisation region 17 69 IPR006456 -
Viun7g02406 198 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 69 IPR006456 -
Viun7g02406 198 Gene3D - 116 192 - -
Viun7g02406 198 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 68 IPR006456 -
Viun7g02406 198 NCBIfam homeobox domain, ZF-HD class 131 188 IPR006455 -
Viun7g02406 198 SUPERFAMILY Homeodomain-like 124 192 IPR009057 -
Viun7g02406 198 FunFam Zinc-finger homeodomain protein 2 118 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02406 Viun-Chr7 28154137 28155105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02406 14 194 ZF-HD Transcription Factor Family AT1G14440 51.759 5.75e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Viun7g02406 ZF-HD_dimer 2.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02406 - - gmx:100793926 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02406 7 28154137 28155105 Viun7g02406 7 28154137 28155105 ECH