Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02405 ATGGCTTCCAGGCGTTTGAGGACATTCAAGCGGTGGATGAAATCGAAGGGTTTCCAGTGGAGCGATACATTGGAGTTTGTGGATACACCTGACGAGGGAATAGCGATGAGAGCTTTGTGCCAGTTGGAGGAAGGTGATGTTGTGGCCAAAATGCCAAAAGAAGCTTGCCTCACCACCAAGACTAGTGGGGCATGTGAGATCATTGAAGAGGCTGGTTTGGATGGTCATTTGGGGCTAGCATTTGCCATCATGTATGAGAGAAGCTTGGGTGAGGACTCACCTTGGTATGGATACCTTCAACTCTTGCCTTACCAAGAATGCGTGCCAATTGTTTGGACCCTCAATGAAGTAAACGAGCTTTTGTGTGGTACTGAGCTTCACCAGACAGTGCAAGAAGACAAGGCTCTGATTTACGAGGACTGGAAAGAGAATATTCTCCCCCTATTGGATTTAGCACCTTTAAAGCTAAACCCGAAATTCTTTGACCTAGAACAATACTTTGCTGCGAAAAGTCTTATATCGTCACGATCCTTTGAGATTGATGATTACCATGGTTTTGGCATGGTTCCTTTGGCAGATCTATTCAATCATAAAACAGGTGCAGAAGATGTGCATTTCACTGCTATGTCCTCTAATTATGAATCAGGTAGTGATGTTGATGGTAGTAATAATGATGAGGGCATTGTTAAGGAAGAAGAAGCATTGGCTCAAAATTCCTCTACGGATATGATTGCATCAATTGATCCTAATGTTGGAAACAGCATTGATAGTGATTTGGAGAGTTCTTCAGTTAGCGAGGATGATACTTCTATGTTGGAGATGATTATGATAAAAGATGTCAGTAGTGGAACTGAGGTATTTAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACCGAGCAAGACAATTCCTATGATATTGTAAACATAGACATGGAGCTGGTACTTCAATGGTGCTCTTCAGCTTTTTCTGACCGCCACAGTAGAGCAAGAGTTTCCCTTTGGAGAAGGTTAGGCTATTCCGCGTGTGGCAGCCAAGACTCTGAATATTTTGAGATCTCATTTGACGGAGAACCACAAATTGAACTCCTCATTTTACTACACATCATGTTATTGCTAGATGATGCTTACCAAAAGTTAGACCTATCGGTATCAGTTGCTGGGAATTGTCCTGAATCAAATGGTGGAACTACCCATCTGAATGGTAATATCTTCCCCAACGAAGCATTTAACATGAGCAAGAAATCCTTGCTGCCTAAAAGGGTTTGTGATGCTTTGTTGTCGCTTGCTGACATGAGGGAGAGTCTCTATGGTTTGAACTCACTGGAAGATGATATTGAAGCATTGGAAAGGTGTAGTTTAGCTAGAGAGAGGAAGCTGTATCATTCTTTGGTGTTGCGCATCAATGAAAGGAAGATTCTTCAAAAGCTCAGAAATTATGCTTCACAGCCATTTGAAATCAATGAGCATAGTTCACCTAGGAAGAAATTGAAAAGAACAACAAAGAAAACGGGGTGA 1536 0.418 MASRRLRTFKRWMKSKGFQWSDTLEFVDTPDEGIAMRALCQLEEGDVVAKMPKEACLTTKTSGACEIIEEAGLDGHLGLAFAIMYERSLGEDSPWYGYLQLLPYQECVPIVWTLNEVNELLCGTELHQTVQEDKALIYEDWKENILPLLDLAPLKLNPKFFDLEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMSSNYESGSDVDGSNNDEGIVKEEEALAQNSSTDMIASIDPNVGNSIDSDLESSSVSEDDTSMLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDMELVLQWCSSAFSDRHSRARVSLWRRLGYSACGSQDSEYFEISFDGEPQIELLILLHIMLLLDDAYQKLDLSVSVAGNCPESNGGTTHLNGNIFPNEAFNMSKKSLLPKRVCDALLSLADMRESLYGLNSLEDDIEALERCSLARERKLYHSLVLRINERKILQKLRNYASQPFEINEHSSPRKKLKRTTKKTG 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02405 511 ProSiteProfiles SET domain profile. 22 291 IPR001214 GO:0005515
Viun7g02405 511 SUPERFAMILY SET domain 266 310 IPR046341 -
Viun7g02405 511 PIRSF RMS1_SET 1 490 IPR011383 GO:0016279|GO:0018026
Viun7g02405 511 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 462 - -
Viun7g02405 511 Gene3D - 307 496 IPR036464 -
Viun7g02405 511 SUPERFAMILY SET domain 3 206 IPR046341 -
Viun7g02405 511 Pfam SET domain 33 291 IPR001214 GO:0005515
Viun7g02405 511 CDD SET_LSMT 24 305 - -
Viun7g02405 511 Gene3D set domain protein methyltransferase, domain 1 2 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02405 Viun-Chr7 28148357 28151900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02405 2 508 NAC Transcription Factor Family AT3G56570 53.545 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g02405 SET 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02405 - K05302 vra:106769924 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02405 7 28148357 28151900 Viun7g02405 7 28148357 28151900 ECH