Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02355 ATGAAAGGGGGGCGATCGCATCGCCCTCAGAGCTCTGACCCACCGGATGAGTGGGTGGACGGGTCGTGGACGGTGGATTGCATCTGCGGCGTGACCTTCGATGACGGCGAGGAGATGGTGAAGTGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGAGGTACGTGAAGGGCGACGACACCTTCGCCTGCGACAAGTGCAAGGCCAGGCACAACAACAACCCGGAGGAGACCGAGGTGGCGCAGTTCCTCGTGGAACTCCCCACCAAAACCATCTCCATGGACAACAAAAAGGCCCTACCCTCTCGGCCCAGGCTCTGGACCGATAAGCCCATCCAGGAGCGGGTCCACGTCCAGGGCCCGGCCGAAGGGGACCCTTCCATCTTTTCCGCCACCTCCGTGTCCTCGATTTTCTCCCCTCACCTCTGGAAGGCCTGCGGGTACGTTCCCAAGAAGTTTAATTTTCAGTACAAGGAGTTTCCGTTCTGGAGCGATAACGACGAGGATAAGGATAACGCTAACGAGAGTTTACAAGCACAAACAGAAGCTCAACCACAGGCGCAAGATAATAACAAGAATGGGGCCGGGGCTCTTGTTTATTTGTCTAAAAACGGTGATAATAGTGGTGCTGCTCTTGTATTGGACCCTTCCTCTGTTGACGCGAGATCTGGTCACGCCAAGGAAACCGAAATGGGCAAGTTTGGGAGCGAGCATGTGCTGCCACGTGTCCACAGTGAGGTGAAGAAGGAGAGGACTCTGCTGAGACCTCCCGTTGTTCATAACAGTAAGCGCAGCAAAGGGGATTTTGGGTCATCAAATTCAAAAGACCGGAGCGGGAAGAAGCGAGTTAGGACTACTTCTGACAGAGAGGTGGATCCCAGGAGGAGAACTCTGCATTCTTCTAAATCAGTATTTACAACCACTGGTGATGCAAAACAAGTGGACTTTTATGAGGACAGAGGACCAAAGATTTTAAAGGCTGACACTAGGAGCATAAAGAATAAAAATTTAAAAGAGTCAGTTGTTCAAGAATGTGTTTCTGATGATTATTTGGCTGCTGATACCATCATGGAGGAGCCAAATAATAACTTAACAACTACGGAGGACTCTTCGGAACCATTATATCCTGACACGACTAGACATGGTGTTTCTGTTGTAGATGTTCCAGCAGAAGAGAAGCCTAATCATAAACCTCCTACTGTGGTGGAGATGTCTTCTAAGACAGATGATGCTGTTACATCGGTTTTAAAGCAGAATAATGTTGGAAATGCTTCAACTAAAGAAAAGGATGGGGATTGCTCAGTAGCTGATAATGCAGATGATAGTTTAGTAGTAAGAAGTGCTGCAAGTCCTCAAACTGAAGGTTATTGCGGTTCTGCACCAGAACTTGCGGATAACCAATTTTCTCAAGATCTTGACCGCAATAAGCGTACAAGCTCTACAAAATGCAAAGTTAAGATGAAGAGGGAAGACGACATTGATAATTTTAAGAAGCCCTCAATTTTTCATCCTTCACCCATCAGTGATCTTAAAAACAATGAAAAACTATCTGATCACAAATCTGATGTTGAAGTGAATGATGCACCAGTTCCTAGTTTACTATCATGTGAAAATAAGGTCGGCAGTGTGGACATTTCATCAGAAGTAATTCCTGCTGATTATATCAATAAGCCCAATGAATTATCTGGTGACTTTTGTCCTAGAAAGCAAGAACTGGAGGGTTATGAAGGTTCCTTGGAAACACAAAAGGTATTTTCTGAAACCAAAGATGGTTCAGATTCTGCTAAAGATCCTTCAAAATCTGAAGCACTTGGATGTCCAGCTAAAGTGCTAGCATGTGTTGGAAAGTCGTCTCCAACTTCGTCAACCATAAATTCCAAATCATTGGGTCATGATATCAAATCTGAAGATACTGAAACAGCTAATCCTTTTACGAAGCATGGAGCCATGACTGATTCTAGTGTTCAGATAAAGAATGAAAACTGTACAAATAATGTTGCCAGGGATGAAAATCCAAAGAAGTCTGTAAGAGAGCGACCAAAATCCTCCTTGAATTCCAATTCAAAGGGATTGCATTCAAGCAGGAGTGTGCATAATTCTGTGTCCAAGCAAGCAAATTCAGATGCGAGAGATTCTGTTCCAGTATCTTCTAAGTCTTTGATACATCAGACTGCAAGTATATCAGGCTCGAGTGAGTCCAATGCATCATTGCACAATCAGAAGGTTCTACAAGTGCAGAATAAGATTTTATCTTCAGCACCACAGAAAGTTGAAAAAGTTAACCAAACAAACATTGCCACCTCCTCTAAGTTGAACCAAGGTCATGTGCCATCAGTGAATCCTTCTCCAATATCAAATTCTTCAATGTTGAGTGATGAAGAGCTCGCTCTGCTACTGCACCAAGAACTGAATAGTTCACCCCGTGTACCTCGAGTACCACGAGCACGCCATGCGGGTAGCTTGCCCCAGCTTAGTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACATCAGGTGGAGGAAAGGATCATTATTTGGTATCTAGACGAAAACACAAGGATGCATCTCGAGATGGGTCTGGCAGTTCTCGTGAACTGGAAGATGAAGCTAAAAAGATAGAGAAGGAGAAGGGTCCAACCTCTTCTGAACAGAGGAAGCAAGATATGTCATATATGGAGGATGCTCCTGCAAGGGAAGAAGGCCCTGCTTCTATGACAGCAGCAAACTCCATTGCAAACAACATTGTTTCTTCCACTTCTGCAATTGCAAACAGTGATCCATCTTCCCCTCCAGAGGATCAGAATCTATCATCCATGCGTAACTCACCTAGGAATATCTCTGATGATGATACAGTGACTGCGGGAAGGCCAGCTCATCACACCTTACCTGTTTCAGTTTTCAAGTACGTTGACAAAGATTATTACCAGTGTCAATTCCAGATTTTCAACCACTAA 2958 0.452 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNNNPEETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPIQERVHVQGPAEGDPSIFSATSVSSIFSPHLWKACGYVPKKFNFQYKEFPFWSDNDEDKDNANESLQAQTEAQPQAQDNNKNGAGALVYLSKNGDNSGAALVLDPSSVDARSGHAKETEMGKFGSEHVLPRVHSEVKKERTLLRPPVVHNSKRSKGDFGSSNSKDRSGKKRVRTTSDREVDPRRRTLHSSKSVFTTTGDAKQVDFYEDRGPKILKADTRSIKNKNLKESVVQECVSDDYLAADTIMEEPNNNLTTTEDSSEPLYPDTTRHGVSVVDVPAEEKPNHKPPTVVEMSSKTDDAVTSVLKQNNVGNASTKEKDGDCSVADNADDSLVVRSAASPQTEGYCGSAPELADNQFSQDLDRNKRTSSTKCKVKMKREDDIDNFKKPSIFHPSPISDLKNNEKLSDHKSDVEVNDAPVPSLLSCENKVGSVDISSEVIPADYINKPNELSGDFCPRKQELEGYEGSLETQKVFSETKDGSDSAKDPSKSEALGCPAKVLACVGKSSPTSSTINSKSLGHDIKSEDTETANPFTKHGAMTDSSVQIKNENCTNNVARDENPKKSVRERPKSSLNSNSKGLHSSRSVHNSVSKQANSDARDSVPVSSKSLIHQTASISGSSESNASLHNQKVLQVQNKILSSAPQKVEKVNQTNIATSSKLNQGHVPSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLSSASATSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSRELEDEAKKIEKEKGPTSSEQRKQDMSYMEDAPAREEGPASMTAANSIANNIVSSTSAIANSDPSSPPEDQNLSSMRNSPRNISDDDTVTAGRPAHHTLPVSVFKYVDKDYYQCQFQIFNH 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02355 985 MobiDBLite consensus disorder prediction 222 307 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 451 524 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 616 630 - -
Viun7g02355 985 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 76 IPR013083 -
Viun7g02355 985 MobiDBLite consensus disorder prediction 167 201 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 222 258 - -
Viun7g02355 985 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
Viun7g02355 985 MobiDBLite consensus disorder prediction 358 410 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 682 718 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 177 198 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 573 603 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 808 956 - -
Viun7g02355 985 PANTHER UNCHARACTERIZED 1 965 - -
Viun7g02355 985 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Viun7g02355 985 MobiDBLite consensus disorder prediction 822 836 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 470 499 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 843 896 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 767 788 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 907 950 - -
Viun7g02355 985 SMART PHD_3 26 69 IPR001965 -
Viun7g02355 985 MobiDBLite consensus disorder prediction 359 374 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 270 300 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 643 670 - -
Viun7g02355 985 MobiDBLite consensus disorder prediction 616 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02355 Viun-Chr7 27554226 27561922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02355 25 68 PHD Transcription Factor Family AT5G22260 44.681 2.95e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02355 - - gmx:100810855 1469.52