Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02331 ATGCCTTCTCTTCCTCTTATGGACAACAATTTGGTTCCAATCTCTCAGGTTTGTGCTGAGAATAATTTCCCTGTGGCAACGGAAGCTGCTACAGAAGTTGTTGAACAAGTGCATTCATCAAATTCCAATGATGACATAAGAGTGAAGTTTCCATTTGATCTTAATGCTGAAGTTGATGATGAGGTGGACTCAATATCTTGCACTGAGGAAGCACGTCCCAAAGTTGGTGAAACCATTCCAACTTTACCTTCCACTCATTCAGAGGTCACACCAGAACATGTTCTTCCTACAGACATGGACAATGAAGACAGAGCAAGTGTTGTCGAGGGAGGAACACCTACCTCTGAAACCAGGAAAAGAAAGAAATCTATGGAGGGGGAATATGTGAAAGGGAATTCGAGGTCATTTCGCGGAAAAACATTCACTGTAAATGTTGAAAGCCGAAGAAGGACCATAGTGGACGATGGTTATCGTTGGCGAAAATATGGCCAAAAAACTATAAAGGGAAATTTGTTCCCTAGTGATTCAATACTGATAAACTTTTCATGGGAATTTTCTAGGGCCTACTACAAATGCACAGGTTCTGGGTGTTGTGTAAGGAAGCACGTGGAACGAGATTCGCGCAACAGAAAGAACGTAATCACTACTTACGAGGGAAAACACAATCATGAACAACCAATCCCTAAGAACCCTAATGAGAAACATTATGCAGAAGACGATGAAGATGAAGAAGATGAAACAGAAGAACTTGGTAGTGCTGCATCCAATGCTCGATGGAATTTTAGATTATCTGAGAGTATGAATTTTCTCAACACTCCACAACCTGCACAACATCGACTTCACACTCTTCAACTATCTCGTAATGACGCAAACCCTGGATTCGCCTCTGTGTGGCCTTTTGCAAGTTTCAACATGAATATTACATCTTCTTCTCACACCACTCAGATGCATTATTCTTCTTTCTTGAACAATACCAACACCACCATGCCTTACCGTTTCTATGGACTCGATCATAACCGTTTTGGTGCCCCTCAAACTGAGTTTCCAATGCCACCACCCTTTAGCATTCCTTCTTCTTCTGAGGTTTTTTCTCGCGCTAGGGTTAATGCTGTTGGCTCCAGTTCAGTCTTTCCTTTAAGGGGTGCAGCATATCGCAGATGGTAA 1164 0.4218 MPSLPLMDNNLVPISQVCAENNFPVATEAATEVVEQVHSSNSNDDIRVKFPFDLNAEVDDEVDSISCTEEARPKVGETIPTLPSTHSEVTPEHVLPTDMDNEDRASVVEGGTPTSETRKRKKSMEGEYVKGNSRSFRGKTFTVNVESRRRTIVDDGYRWRKYGQKTIKGNLFPSDSILINFSWEFSRAYYKCTGSGCCVRKHVERDSRNRKNVITTYEGKHNHEQPIPKNPNEKHYAEDDEDEEDETEELGSAASNARWNFRLSESMNFLNTPQPAQHRLHTLQLSRNDANPGFASVWPFASFNMNITSSSHTTQMHYSSFLNNTNTTMPYRFYGLDHNRFGAPQTEFPMPPPFSIPSSSEVFSRARVNAVGSSSVFPLRGAAYRRW 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02331 387 MobiDBLite consensus disorder prediction 77 125 - -
Viun7g02331 387 SUPERFAMILY WRKY DNA-binding domain 150 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g02331 387 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 255 IPR044810 GO:0003700
Viun7g02331 387 MobiDBLite consensus disorder prediction 216 252 - -
Viun7g02331 387 MobiDBLite consensus disorder prediction 216 236 - -
Viun7g02331 387 ProSiteProfiles WRKY domain profile. 148 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g02331 387 Pfam WRKY DNA -binding domain 154 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g02331 387 Gene3D WRKY domain 139 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g02331 387 SMART WRKY_cls 153 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02331 Viun-Chr7 27399934 27404431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02331 115 229 WRKY Transcription Factor Family AT5G56270 47.826 5.26e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g02331 WRKY 5.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02331 K18835 - vun:114191352 764.607