Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02330 ATGGTGGTGGAAGTGTTGATAACAGAGGAAGAAGACGAAGTTGTGGTTGCTCCAACCAACTTTTCAATGGTGGAAGAGGGTATTTTTCGCTCCAGTTTCCCTCGATCTTCAAATTTCTCTTTTCTTGAAACTCTCAATCTTCGTTCCGTCGTATATTTGTGCCCCGAACCCTATCCACAGCAAAATCTACAGTTTCTTCAATCACAAAATATTAAGTTCTTCCACTTTGGTATCGAAGGCAAAACGGATCTTTCTGTGCCTGCAATTAAGCATTTGATCTTGGAGGCCGTCAAAGTTTTAATTGACGTGAGAAATCACCCAGTTCTAGTCCACTGTAATCAAGGAAAGCATCGAACTGGTTGTGTTGTTGGATGCTTGAGAAAATTGCAGAGTTGGTGTTTATCTTCTGTGTTCGAGGAGTACAAGAAATTTGCTGGTGCTAAATCCAGAACAACAGAATTAAGTTTCATAGAAACGGTTGATCTCTTAAACCTGAGAAAGTGTCTTAACAGCATCATATACCAATACCTAGGACATTCTTCAAAGAAACGCAAGTTGCTGTATAGAGATGATAATTTACTCAAGTTCCACTTCACATCAGTTTAA 606 0.3927 MVVEVLITEEEDEVVVAPTNFSMVEEGIFRSSFPRSSNFSFLETLNLRSVVYLCPEPYPQQNLQFLQSQNIKFFHFGIEGKTDLSVPAIKHLILEAVKVLIDVRNHPVLVHCNQGKHRTGCVVGCLRKLQSWCLSSVFEEYKKFAGAKSRTTELSFIETVDLLNLRKCLNSIIYQYLGHSSKKRKLLYRDDNLLKFHFTSV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02330 201 Pfam Tyrosine phosphatase family 15 161 IPR004861 -
Viun7g02330 201 FunFam probable tyrosine-protein phosphatase At1g05000 14 164 - -
Viun7g02330 201 ProSiteProfiles Dual specificity protein phosphatase domain profile. 20 169 IPR020422 GO:0006470|GO:0008138
Viun7g02330 201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 158 IPR029021 -
Viun7g02330 201 PRINTS Plant and fungal dual specificity phosphatase signature 52 65 IPR020428 GO:0016791
Viun7g02330 201 PRINTS Plant and fungal dual specificity phosphatase signature 88 102 IPR020428 GO:0016791
Viun7g02330 201 PRINTS Plant and fungal dual specificity phosphatase signature 15 32 IPR020428 GO:0016791
Viun7g02330 201 PRINTS Plant and fungal dual specificity phosphatase signature 71 85 IPR020428 GO:0016791
Viun7g02330 201 Gene3D Protein tyrosine phosphatase superfamily 15 163 IPR029021 -
Viun7g02330 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 175 - -
Viun7g02330 201 ProSitePatterns Tyrosine specific protein phosphatases active site. 110 120 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02330 Viun-Chr7 27382050 27383269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02330 6 193 Protein tyrosine phosphatase (PTP) family AT3G02800 61.780 6.92e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02330 K18045 - gmx:100808199 327.405