Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02322 ATGTTCAAATTCTTGAAAGAGGTGGTGGCTGGATCTGGCACCGGCCTCAAAGATCTTCCGTACAATATCGGTGAACCTTACGCTTCTGCTTGGGGCTCGTGGCTTCATTTTCGCGGCACCTCCAAGGATGATGGTGCTCCAGTGTCAATATTTTCTCTGTCTGGGAGCAATGCTCAGGATGGACATTTAGCTGCGGGTCGTAATGGTGTTAAGCGTCTACGCACTGTTAGGCATCCAAATATTTTATCTTTTCTTCACAGCACAGAGGTTGAAACTGTTGATGCTGGTTCTCCCAAGGTTACAATTTATATGGTGACCGAGCCTGTGATGCCGCTGTCAGACAAGATTAAGGAGCTAGGTCTTGAAGGTAGCCAGAGGGATGAATATTATGCTTGGGGCCTGCATCAAATAGCAAAGGCTGTGAGCTTCTTAAATAACGATTGTAAACTGGTTCACGCTAATGTTTGCTTGGCAAGTGTCGTTGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAATAACGAAACTTCCTCTGGGCAAATGCTGCAATATGCATGGCTTGTTGAAGCACAATACAAATCAATGGAACTGGCAAAATCTGACTGGGCTGGAATTAAGAAGTCTCCTCCTTGGGCCATTGATTCTTGGGGCATGGGTTGTCTTATCTATGAGCTATTCTCTGGTTTAAAGTTGGGCAAAACGGAGGAGTTACGCAACACTGTCTTCATTCCTAAGTCTCTGCTTCCAGATTACCAGCGGTTGCTGAGTTCTACACCCTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGCGAGTATTTTCAAAATAAGTTAGTAGACACGATTCATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAAGACACTTTCTTCCGCAAGCTTCCAAATTTGTCAGAGCAACTTCCTCAGCAGATTGTGTTGAAAAAGTTGCTTCCTTTATTAGCTTCTGCACTTGAATATGGTTCAGCCTCTGCCCTGGCTTTGACTGCATTGTTGAAAATGAGTTCCGCACTGTCAGCTGAGGAGTTCTGTGTCAAGGTGCTTCCAACCCTTGTTAAGCTTTTTTCATCAAATGATCGAGGTATTCGAGTTGGACTTCTACAACATATTGATCAGTATGGGGAGTCATTATCAGCACAAGTTGTTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCCGCTTTTCTGAGGGAACTTACTCTCAAGTCCATGCTAATTCTGGCTCCAAAGCTGTCTCAAAGGACCTTTTCGGGGTCATTATTAAAGCATTTGTCAAGGTTACAGGTCGATGAAGAACCAGCTATACGAACAAATACTACCATCTTGTTGGGAAACATTGCAAGCTACTTAAACGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTCCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCTACCAGTTCCTACTATGACATCACTGAAATTGCAACTCGGATTCTTCCTAATGTTGTTGTGCTCACAATTGATCCTGACAATGATGTGCGATCTAAGGCATTTCAAGCTGTTGATCAATTTTTGCAGATGGCGAAGCAATATTATGAAAAGACGAATACAGCAGAGGATACTGAGGGAGCTAGCATGGGGATCTCTTCAATTCCTGGAAATGCTGGTTTACTTGGATGGGCTATGAGTTCCTTGACTCTGAAGGGTAAACCTTCTGATAATGCTCCAGTCTCTTCTGTGAGTTCTACGGCACTTCCTCCGGCATCTGCTAATGCAGGCTCGGTTATAGATACTCCTCCAACAGCACCTCTTCGTGTAAGGTCTGCGCCAGATTTTGCTGAGCAACCTGTCCCTACTTCCCCAACATCAACAGACGGCTGGGGAGAAATGGAGAATGAACTCGACGAGGAGTGTGAAAATGACAAGGATGGGTGGGATGATCTGGAACCACTTGAAGAAATCAAACCAACTCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCGGTTTCGCAACCTGTTTCACAGACAAAACAAGCCGCGAATTTGCAATCCAAAAGTACATCAAAGTTGAAAAAGGATGAAGATGATGAGTTGTGGGGTTCGATAGCAGCTCCTGCTCCAAAAACATCAAAATCTTTTAATTTGAGATCAACTGTAACCGATGATGATGATGATCCTTGGGCTGCCATCGCTGCTCCTGCACCCACTACTAAGGCCAAACCCTTGTCTAGTGCCAGAGGGCGGAGTGCTAAACCTGCTGCTCCAAAGTTAGGTGCCCAGCGGCTAAACCGAACATCGTCCGGCGTGTGA 2391 0.4454 MFKFLKEVVAGSGTGLKDLPYNIGEPYASAWGSWLHFRGTSKDDGAPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVETVDAGSPKVTIYMVTEPVMPLSDKIKELGLEGSQRDEYYAWGLHQIAKAVSFLNNDCKLVHANVCLASVVVTQTLDWKLHAFDVLSEFDGNNETSSGQMLQYAWLVEAQYKSMELAKSDWAGIKKSPPWAIDSWGMGCLIYELFSGLKLGKTEELRNTVFIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLSEQLPQQIVLKKLLPLLASALEYGSASALALTALLKMSSALSAEEFCVKVLPTLVKLFSSNDRGIRVGLLQHIDQYGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTFSGSLLKHLSRLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTIDPDNDVRSKAFQAVDQFLQMAKQYYEKTNTAEDTEGASMGISSIPGNAGLLGWAMSSLTLKGKPSDNAPVSSVSSTALPPASANAGSVIDTPPTAPLRVRSAPDFAEQPVPTSPTSTDGWGEMENELDEECENDKDGWDDLEPLEEIKPTPALANIQAAQRRPVSQPVSQTKQAANLQSKSTSKLKKDEDDELWGSIAAPAPKTSKSFNLRSTVTDDDDDPWAAIAAPAPTTKAKPLSSARGRSAKPAAPKLGAQRLNRTSSGV 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02322 796 MobiDBLite consensus disorder prediction 596 674 - -
Viun7g02322 796 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Viun7g02322 796 MobiDBLite consensus disorder prediction 691 713 - -
Viun7g02322 796 MobiDBLite consensus disorder prediction 689 796 - -
Viun7g02322 796 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Viun7g02322 796 MobiDBLite consensus disorder prediction 654 672 - -
Viun7g02322 796 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 10 775 - -
Viun7g02322 796 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02322 796 Gene3D - 282 561 IPR011989 -
Viun7g02322 796 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Viun7g02322 796 MobiDBLite consensus disorder prediction 596 614 - -
Viun7g02322 796 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02322 796 Gene3D Transferase(Phosphotransferase) domain 1 109 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02322 Viun-Chr7 27338073 27349700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02322 70 291 MAP Kinase Kinase Kinase AT5G66850 25.532 1.84e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Viun7g02322 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02322 K08876 - gmx:100792884 1338.17