Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02307 ATGAATTGCTTCCCTTGTTGTGCACCTAAGAAAAGCCTGAGCAAGAGGGAACATGATGCTCCAGCACCAGCACCGGAACCTGAAGCAGCAGCAGCAGCAGGAGGAGCACCAGCAGCAGCACCAGCACCAGCACCAGCACCAGAAATAAAGAAACAAAAATCAGATGATCAAATCTCAGTTGATCCTGAAAATATTAAGGTAAGGGCTTTCACGTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGATTGTCTGTTGGATGAAGGAATTTTCGGGAGAGTATACAAAGGAGTAATTCCTGCCACCGGCCAGCTTGTGGCCGTGAAGCAACTCGATCGAAATGGGATCGGTAAGGAATTTCTGGGTGATGTTTCTGATCTAAGTCTGATGCAGCATGAGAATCTGGTAAATCTCATTGGTTATTGTGCCGATGGTGATCAACGTCTTTTGGTTTACGAGTTGTTTTCTGGGCGCACTCTTGAAAGCCGTCTTTTTGAGAATAAAGAGGATGAAGGACCACTAAGCTGGTTTGACAGAATGAAAATAGTTGCGGGTGCTTCTAAAGGGCTAGAGTACCTACACGAGAGTGCAGACCCTCCAATTATATTCAAGGATTTGAAAGCATCGAGCATCTTGGTGGACAATGATTTCAAAGCCAAAGTCCGTGATGTTGGAATGGCCAAGCTTTTTGGTGCAGACAAGATGAACAACGGACCTCCAAGACTCATGGGCAACAATGGTTACTGCGCTCCGGAGTATGTAAGAGCAGGTCAAATCAGCAAGAAATCAGACGTCTACAGTTTCGGAGTTATCTTGCTGGAGCTCATTACCGGACGAAGAGCCATAGACACTACCAGACCAAATGAAGAGCAAAATCTAGTTGCATGGGCAACACCCTTGTTCAGGGACCCGAAGAGATATCCAGATATGGCGGATCCGGTTCTTAAAAGGAATTTCCCAGATAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCTCGACCTTTTATCAGTGACGTTGTAACTGCTCTCAGTTTTCTTTCCGCTGCTCCTGTTGCTGCGCCAGCACCACCCAGTGCTAGTGAAAGCGAAACTGGATCAGTATCCAGAAAGGGGAGCCGTAGATCATCAGTAGATGGTGACGGGCAACTTCCGCCGGCGGTTTCCTCTAAAAACAGTCGCAAAGGCAGCAAAAAATCTTCACTGAAACTGTTAAGCCAGAAGCTAAGCCAAAAATCCTCTGGTGAAGATTCTGGGCGGAAGAGCGGGAAAAAGTCCCACAAAGATCCAAGCCAGAAGAAGAGCAGCAGAAAATCTTCCCTGAGAGGTTTAAGCCACAAGAGCAGTAAAAAATCGTCTAGCAGAAAGAGTAGCAAAGACTCGGAGGATGGAAGCGTTTCCTCAAGCTGCCGTAGCAGCAGTGTGGCATCAGATGATGAAAGGTCCATGTCAGCTCGTAGCAGCATGAGGCTGTCACAAGGGAGTGATCACTCTGACTCAAACAACAGCAGCAGAAGGACAGAGGATGCCGACCATAACTTGCTAGATCGTACAAGCACCATGGAATCTGATGTGGGAAGTGGTCACCCTTTTGACCAAAATAGCAGCAGTGGATCAAGCGTTTACTCTCGATAA 1665 0.4697 MNCFPCCAPKKSLSKREHDAPAPAPEPEAAAAAGGAPAAAPAPAPAPEIKKQKSDDQISVDPENIKVRAFTFRELATATKNFRQDCLLDEGIFGRVYKGVIPATGQLVAVKQLDRNGIGKEFLGDVSDLSLMQHENLVNLIGYCADGDQRLLVYELFSGRTLESRLFENKEDEGPLSWFDRMKIVAGASKGLEYLHESADPPIIFKDLKASSILVDNDFKAKVRDVGMAKLFGADKMNNGPPRLMGNNGYCAPEYVRAGQISKKSDVYSFGVILLELITGRRAIDTTRPNEEQNLVAWATPLFRDPKRYPDMADPVLKRNFPDKDLNQVVAIASMCLQEEAEARPFISDVVTALSFLSAAPVAAPAPPSASESETGSVSRKGSRRSSVDGDGQLPPAVSSKNSRKGSKKSSLKLLSQKLSQKSSGEDSGRKSGKKSHKDPSQKKSSRKSSLRGLSHKSSKKSSSRKSSKDSEDGSVSSSCRSSSVASDDERSMSARSSMRLSQGSDHSDSNNSSRRTEDADHNLLDRTSTMESDVGSGHPFDQNSSSGSSVYSR 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02307 554 FunFam Serine/threonine-protein kinase PBS1 157 372 - -
Viun7g02307 554 Gene3D Transferase(Phosphotransferase) domain 1 158 359 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 449 463 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 11 58 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 529 554 - -
Viun7g02307 554 Gene3D Phosphorylase Kinase; domain 1 50 156 - -
Viun7g02307 554 Pfam Protein kinase domain 88 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02307 554 MobiDBLite consensus disorder prediction 473 510 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 396 423 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 363 554 - -
Viun7g02307 554 MobiDBLite consensus disorder prediction 511 528 - -
Viun7g02307 554 FunFam Somatic embryogenesis receptor kinase 1 49 156 - -
Viun7g02307 554 PANTHER OS07G0668900 PROTEIN 23 365 - -
Viun7g02307 554 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Viun7g02307 554 ProSiteProfiles Protein kinase domain profile. 82 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02307 Viun-Chr7 27267635 27270556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02307 50 361 Glycoside Hydrolase AT3G07070 59.554 6.95e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Viun7g02307 Pkinase 7.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02307 - - vum:124829893 724.931