Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02293 ATGGCTTCTCTCTCCTGCTCCTCTCACCTCGCTACACTCATCAACCAAACCGACGCCACCAACTACCTCTGTAACCAATTCGATTCCATTTCCAGAAAGCTCAACGACGCCACCTATGCCGTCGATAACACCTACCTACTTTTCTCCGCCTATTTGGTATTCGCCATGCAGCTTGGTTTCGCCATGCTCTGCGCGGGATCCGTCCGAGCAAAGAACACCATGAACATCATGCTCACCAACGTCCTTGACGCCGCCGCAGGCGGCCTCTCCTACTACCTCTTCGGCTTCGCTTTCGCCTTCGGTGCCCCTTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTTAGAGACTATCCCACTCCCACCGCCGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCCGGAATCACCAGCGGCTCCATCGCCGAGAGAACACAATTCGTGGCTTATCTCATTTACTCTTCTTTTCTAACCGGCTTTGTTTACCCCATCGTTTCGCATTGGTTCTGGTCGGGGGACGGTTGGGCCAGCGCCACAAGAATCGACGGGAACGTCTTGTTTGGATCCGGGGTAATCGACTTTGCTGGCTCCGGCGTCGTTCACATGGTTGGTGGCATAGCGGGTTTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGGCGGTTCGACCGGACGGGCCGGTCCGTTGCTCTGCGTGGGCACAGCGCGTCTTTGGTTGTGTTAGGCTCGTTTCTGTTATGGTTCGGATGGTACGGGTTCAACCCCGGTTCGTTTTTTACTATAGCGAAGGGATATGGGGGCTTGGGTTATTATGGTCAATGGAGTGCCATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACAGCGGCTCTGACGACGCTTTTCAGCAAGCGGTTATTGGTGGGCCACTGGAACGTGATCGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCCATCACCTCGGGCTGTGCGGTTGTGGAGCCGTGGGCCGCGATAGTGTGTGGGTTTGTGGCCGCCTGGGTTTTGATTGGGCTTAACAAGGTGGCAGCGAAAGTGGAGTACGATGACCCGTTGGAGGCCGCGCAGCTTCACGGCGGGTGTGGCGCCTGGGGGGTGTTGTTCACGGGGCTGTTCGCGAAGAGGGAGTACGTGGAGGAGATTTATGGGATTGGGAGGCCGTGCGGGGCGTTGATGGGTGGCGGCGGGAAGTTGCTGGCGGCGCAGTTGATTGAAATAGTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGACCGCTGTTCTACGGGCTTCATAAGCTGAATCTGTTGAGGATATCGAGGGACGATGAAACTGCAGGGATGGATTTGACTAGGCATGGAGGGTTTGCTTATGCGTACCATGACGATGAAGATGGTTCTAGCAGAGGCGTAGGATTGATGATGCGTAAAATAGAACCTGCTAGTACTTCTCCTTCTCCCCCTGCTGCACCACAACTATCAATATCTTCTCTTTAG 1518 0.5632 MASLSCSSHLATLINQTDATNYLCNQFDSISRKLNDATYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSGDGWASATRIDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFFTIAKGYGGLGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKVAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPCGALMGGGGKLLAAQLIEIVVVCGWVTATMGPLFYGLHKLNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGLMMRKIEPASTSPSPPAAPQLSISSL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02293 505 MobiDBLite consensus disorder prediction 486 505 - -
Viun7g02293 505 Gene3D Ammonium transporter AmtB like domains 19 481 IPR029020 -
Viun7g02293 505 ProSitePatterns Ammonium transporters signature. 198 223 IPR018047 GO:0008519|GO:0016020|GO:0072488
Viun7g02293 505 FunFam Ammonium transporter 23 480 - -
Viun7g02293 505 PANTHER AMMONIUM TRANSPORTER 10 461 - -
Viun7g02293 505 NCBIfam ammonium transporter 42 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Viun7g02293 505 Pfam Ammonium Transporter Family 45 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
Viun7g02293 505 SUPERFAMILY Ammonium transporter 39 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02293 Viun-Chr7 27183540 27185486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02293 21 502 Inorganic Solute Cotransporters AT1G64780 79.630 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02293 K03320 K07573 gmx:100797209 862.448