Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02248 ATGCAAAATGCAACAACATTAAGACGATCCAACACCAAAATGCAAACCCACCTTCTGTTCTTCCTCTACTGTTACATTGGCCTCTCACTTGCTTTTACTGAAGCTGCACCAGATCATGAATTCTCAACTCTTCTCTCAATCAAAGCCACTCTCATTGACCCAATGAGGCATCTCAAAGATTGGCAATTTCCAAGCAATGTGACACAACCAGGATCACCCCATTGTAACTGGACTGGAGTTGGTTGCAACGTTAAAGGCTTTGTAGAGACTCTTGACCTCTCCAACATGAACCTCAGCGGTCGTGTTTCCGACCACATTCAATCTCTTTCGAGTCTGTCTTACTTCAACATAAGCTGTAACAACTTCGCTTCATCACTGCCCAAGTCACTGTCCAACCTCACCTCTCTCGAGAACTTTGATGTCAGCCAGAACTACTTCACTGGCAGCTTCCCCACGGGTCTTGGAAGAGCAGCAGGCTTGAGATTAATCAATGCATCGAGCAATGATTTTTCAGGTTTTCTTCCTGAGGATATTGGAAATGCAACCTTGCTTGAAAGCCTTGATTTTCGAGGGAGCTACTTCATGAGTTCAATCCCCAGGAGTTTTAAGAATTTGCAGAAACTCAAGTTTCTGGGCCTTTCAGGCAACAACTTCACAGGGAGGATTCCAGGATATCTCGGTGAACTAACTTCTCTGGAGACATTGATTATGGGATACAATTTATTTGAAGGTGAGATCCCCGCAAAGTTTGGGAACTTGACCAGTCTTCAATACCTTGACTTGGCTGTAGGAAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTCACAAAACTCAACACAATTTACTTGTACCATAACAACTTCACAGGAGAAATTCCTCATCAACTTGGAAACATCACTTCACTGGCATTTTTGGATCTCTCTGACAATCAGATCTCCGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTGAATCTGATGACGAACAAACTAACTGGTCGAGTACCAGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTCTGGAAAAATTCCTTACATGGTCCTTTGCCACCAAACCTTGGGCTCAACTCTCCTTTGCAGTGGTTGGATGTATCCTCTAACGCATTATCTGGGGATATCCCTCCAGGTTTGTGTACTACTGGAAATCTCACTAAACTAATCCTCTTCAATAATTCCTTCACTGGCTCCATTCCAAGTGGACTTGCAAACTGTTTGTCTCTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCCGTTGGCTTTGGAAACCTCCTTGGCCTTCAACGGCTAGAATTCGCAAAGAACAACCTCACTGGGAAAATTCCCTCTGATATTACCTCATCCACATCGCTCTCTTTCATTGATGTATCTTGGAACAACTTTGAGTCATCTCTACCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAGATATCCCGGATGAGTTCCAGGACTGTCCATCTCTCTCTGTATTGGACCTTTCAAACACCCATGTTTCTGGCACAATCCCCGAGAGTATTGCTTCTTGTGAAAAATTAGTCAACCTTAACCTTCGAAATAACCACTTGACAGGAGAAATCCCAAAATCAATCACGAGCATGCCCACTTTATCTGTTCTTGATCTTTCCAACAATTCATTGACCGGTAGGATTCCTGACAACATTGGCAATTGCCCTGCTCTGGAATTGCTGAACTTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGATGACCATAAATCCTAACGATCTTATTGGCAATGAAGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAATATGGCTGTGACAAGCCATCGAAGGAGCTCACATGTCAGACACATCATAATCGGTTTTGTGACTGGCATTTCAGTGATTTTAGCTTTTGGTGCTGCATATTTTGGTGGTAGATGTTTGTACAATAGATGGCACTTATATAACAACTTCTTCTATGATTGGTTCAAACAGAACAATGAAGATTGGCCCTGGAGACTAGTAGCATTCCAGAGGATCAGCTTCACTAGTAGTGACATTCTGACTTGCATGAAGGAATCAAATGTTATAGGAATGGGGAGCACTGGTATCGTTTACAAAGCTGAAATCCATAGACCTCACGTAACCGTAGCAGTGAAGAAACTGTGGAGGTCAAGGACAGACATAGAAGATGGAAATGATGTGTTGAGAGAAGTTGAACTCCTCGGGAGACTTAGGCACAGAAATATTGTAAGGCTGTTGGGGTATGTACACAACGAAAGAAATGTGATGATGGTTTACGAGTACATGCCTAACGGAAATCTTGGAACAGCTCTGCATGGTGAAGAATCTGCAAGGTTGCTTGTTGACTGGGTTTCAAGGTACAGCATAGCTCTAGGAGTTGCACAAGGGCTTAACTACCTCCATCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCGAGAATAGCAGACTTTGGGTTGGCAAGGATGATGATTCAAAAGAACGAGACAGTTTCCATGGTGGCGGGATCATATGGATACATCGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTATGGGGTGGTGCTTTTGGAGCTTCTAACTGGCAAAACGCCTTTAGACCCTTCGTTTGAAGAATCAACTGACATAGTCGAATGGATACGGAAGAAGAAAAGCAACAAATCATTGTTAGAAGCACTGGATCCTGCCATAGCTAGTCAATGCAAACATGTCCAAGAAGAAATGTTGCTTGTACTCCGGATTGCACTTCTGTGCACCGCAAAGCTTCCCAAGGAAAGACCACACATGAGAGACATCATCACAATGCTTGGTGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGTCAAGAAAGCAGTAGCATGGAAAAGTCCACTGTCTTTACCACCTCACCTGCTGTAAGTCTTTTGTAG 3090 0.4324 MQNATTLRRSNTKMQTHLLFFLYCYIGLSLAFTEAAPDHEFSTLLSIKATLIDPMRHLKDWQFPSNVTQPGSPHCNWTGVGCNVKGFVETLDLSNMNLSGRVSDHIQSLSSLSYFNISCNNFASSLPKSLSNLTSLENFDVSQNYFTGSFPTGLGRAAGLRLINASSNDFSGFLPEDIGNATLLESLDFRGSYFMSSIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELTSLETLIMGYNLFEGEIPAKFGNLTSLQYLDLAVGSLSGQIPAELGKLTKLNTIYLYHNNFTGEIPHQLGNITSLAFLDLSDNQISGEIPEELAKLENLKLLNLMTNKLTGRVPEKLGELKNLQVLELWKNSLHGPLPPNLGLNSPLQWLDVSSNALSGDIPPGLCTTGNLTKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGNLLGLQRLEFAKNNLTGKIPSDITSSTSLSFIDVSWNNFESSLPSDILSIPTLQTFIASHNNFGGDIPDEFQDCPSLSVLDLSNTHVSGTIPESIASCEKLVNLNLRNNHLTGEIPKSITSMPTLSVLDLSNNSLTGRIPDNIGNCPALELLNLSYNKLEGPVPSNGMLMTINPNDLIGNEGLCGGILPPCSPNMAVTSHRRSSHVRHIIIGFVTGISVILAFGAAYFGGRCLYNRWHLYNNFFYDWFKQNNEDWPWRLVAFQRISFTSSDILTCMKESNVIGMGSTGIVYKAEIHRPHVTVAVKKLWRSRTDIEDGNDVLREVELLGRLRHRNIVRLLGYVHNERNVMMVYEYMPNGNLGTALHGEESARLLVDWVSRYSIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKTPLDPSFEESTDIVEWIRKKKSNKSLLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPHMRDIITMLGEAKPRRKSVCHNGGQESSSMEKSTVFTTSPAVSLL 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02248 1029 Gene3D Phosphorylase Kinase; domain 1 719 801 - -
Viun7g02248 1029 Pfam Leucine rich repeat N-terminal domain 38 83 IPR013210 -
Viun7g02248 1029 FunFam MDIS1-interacting receptor like kinase 1 802 1011 - -
Viun7g02248 1029 FunFam MDIS1-interacting receptor like kinase 1 719 801 - -
Viun7g02248 1029 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 37 192 - -
Viun7g02248 1029 SMART serkin_6 719 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02248 1029 MobiDBLite consensus disorder prediction 1001 1029 - -
Viun7g02248 1029 SUPERFAMILY Protein kinase-like (PK-like) 715 993 IPR011009 -
Viun7g02248 1029 ProSiteProfiles Protein kinase domain profile. 719 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02248 1029 PANTHER RECEPTOR-LIKE PROTEIN 55 419 994 - -
Viun7g02248 1029 Gene3D Ribonuclease Inhibitor 371 638 IPR032675 -
Viun7g02248 1029 Gene3D Ribonuclease Inhibitor 37 196 IPR032675 -
Viun7g02248 1029 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 376 638 - -
Viun7g02248 1029 SMART LRR_typ_2 349 373 IPR003591 -
Viun7g02248 1029 SMART LRR_typ_2 565 589 IPR003591 -
Viun7g02248 1029 SMART LRR_typ_2 109 133 IPR003591 -
Viun7g02248 1029 SMART LRR_typ_2 301 325 IPR003591 -
Viun7g02248 1029 SMART LRR_typ_2 205 229 IPR003591 -
Viun7g02248 1029 Gene3D Ribonuclease Inhibitor 197 264 IPR032675 -
Viun7g02248 1029 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Viun7g02248 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Viun7g02248 1029 Gene3D Transferase(Phosphotransferase) domain 1 802 1018 - -
Viun7g02248 1029 Gene3D Ribonuclease Inhibitor 265 370 IPR032675 -
Viun7g02248 1029 PRINTS Leucine-rich repeat signature 304 317 - -
Viun7g02248 1029 PRINTS Leucine-rich repeat signature 565 578 - -
Viun7g02248 1029 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 193 293 - -
Viun7g02248 1029 SUPERFAMILY RNI-like 268 610 - -
Viun7g02248 1029 Pfam Protein kinase domain 721 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02248 1029 SUPERFAMILY L domain-like 61 362 - -
Viun7g02248 1029 ProSitePatterns Protein kinases ATP-binding region signature. 725 749 IPR017441 GO:0005524
Viun7g02248 1029 MobiDBLite consensus disorder prediction 1005 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02248 Viun-Chr7 26870135 26873914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02248 14 1029 Receptor kinase-like Gene Family AT1G08590 64.224 0.0 1299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g02248 Pkinase 8.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02248 - - gmx:100793873 1838.54