LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun7g02229	ATGCACACCCGCGCGAGTCTCTTGCTGCTCTTTTTCTTCCCTGTCTTGTTAAAAGCCGCACCCTCCTCCGATAAAGACGAAGGTGGCAGCGATTCCTTGATGTTGGGATGTGGGTTGGACAAAAACGGTGGCAAAGACAGCGACGGTAGACAATGGAGCTCCGACGAGAAGTACCTCAAAACGAAAAACGACCTCACGTTCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATATATGTCTGCACGAATTTTCAAAACCAAAACATCCTACAAGTTCCCCATCCAAGGTGACAAACGTTACTGGCTCAGGCTCCATTTCTACCCCTCCTCTTACGACACCTTCGACTCCGTTCACTCTTATTTCTCCGTCACCGCAAACAGCCTCAAGCTTCTTTCCAACTTCAGCGCCTCCGTCACGTGCCAAGCCCTCTCACAGGCCTACCTCGACCGAGAGTATTCCCTTGCGCCTTTGGATTCCGACACTCTCACCGTCACCTTCAAGCCCTCTGCCAAGCACGATAAAGCTTTTGCTTTTGTTAATGGGATTCAGCTCGTCGAAATGCCGGAGTTGTTTGACGAGGCTCCCTTGTTGGGCTTCGACGGCCAAACCATGGAGACCAACGCTCTGCATTTTCAGACCATGTTCAGGTTAAACGTTGGAGGACAATACATAGCTCCAAATAATGATTCTGGTCTATCCAGAATGTGGTACGATGATACGCCTTATATTTATGGTTCTGCCACTGGTGTCACCAACCAAGCTACCAAGGATGAAAAAATCGACTACAAAACCCTGCCAGAGTCCATTGCTCCTGTCGATATCTACTCCACTTCCCGATCCATGGGAGGCGATAAGAATATGAACATGGGCTACAATCTCACATGGATATTCCAAGTTGATCCGAATTCTATGTATCTTACCCGGTTGCATTTCTGCGAGTATCACTATTCCAGATTGAATCAGATTGTTTTCAAAATCTTCATCAACAACCGCACAGCGGAGACTGCTGCTGATGTGATTGGGTGGTCCGGAGGTAAAGGAGTGCCAACGTACAAGGATTATGTATTATATGTGAGAGATCGGCCAGGTGATGATCAACTCTGGCTTGCTTTGCACCCTGCAAATGAATCAAAGCCAGAATTTTACGACGCGTTACTCAACGGGGTGGAGGTCTTCAAGCTCAATGACACAGACCTGTCTGGTCCCAATCCTCAACCTTCTGACTTGCTGATTCAATATGAGCGCAAGGCAAATACTTTCCATAGCAAACATGAGACTAATAGGACTTTTGTTATAAGCACTGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCTTTGATAATTGTTGCTGCTCGTCAGAAAAAGAAAAAGAGAACTCCGGGGACGTACAGCGCCACGTCCAGCTGGCTCCCTCTTTATGGCCATTCGCAGACAGCAGGCACCAAATCCACAGTATCAGGGAAGAGTGTGGGCCATGCCAACCTAACCGCCATGGCTCAAGGATTGTGCCGCTTTTTCTCCTTACAGGATATGAAGCAAGCAACCAAGAATTTCGATGAATCTAACGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATCGATAATGGGTTCAAAGTGGCAGTGAAGAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACAGAGATTGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGGTGATGAGATGTGTCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAACACCTTTACAAGGGAACCAAACCATTGGACCTGCTATCATGGAAGCAAAGGTTGGAGATCTGCATAGGAGCCGCAAGAGGCCTTCACTACCTTCACACTGGAGCAAAATACACCATCATTCATAGAGATGTGAAAACAACCAACATTCTCCTTGATGAAAACTGGGTGGCGAAGGTTTCAGATTTTGGACTGTCCAAAACAGGTCCAAACATGAATCAAGGTCATGTCAGTACTGTGGTGAAGGGTAGCTTTGGATACTTAGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAGTCTGATGTGTACTCGTTTGGGGTGGTGCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTCAACCCTAACCTTCCCAAGGAACAGGTAAGTCTTGCGGAATGGGCATTGTACAACATAAGAAGAGGAACACTTGAGGACATCATTGACCCCAGCATCAAAGGGAAGATGAACCCTGAAAGCTTGACCAAGTTTGCTGATGCAGCTCAGAAATGTGTATCTGATCTTGGATTCGAACGACCCTCCATGAATGACCTATTGTGGAACCTCGAATTCGCTCTCAACTTGGAAAAAAGCACAGATGGTTCAGCTGCTCTAGATCACGAAGGTGAGTTCTCAGAAGTAAGCTTGGAAGACAATACCAATAACAGGGCTGCTCATTACAAAAACCTCAGCCTTGAAAGCGAGAAAGGGCTTAGCCAAGACCCCAGTAATGATAACTCTGCTGTCATCTTCTCTCAAATTGCCAATCCATCAGGACGATGA	2598	0.4727	MHTRASLLLLFFFPVLLKAAPSSDKDEGGSDSLMLGCGLDKNGGKDSDGRQWSSDEKYLKTKNDLTFKASFQDPSLLSEVPYMSARIFKTKTSYKFPIQGDKRYWLRLHFYPSSYDTFDSVHSYFSVTANSLKLLSNFSASVTCQALSQAYLDREYSLAPLDSDTLTVTFKPSAKHDKAFAFVNGIQLVEMPELFDEAPLLGFDGQTMETNALHFQTMFRLNVGGQYIAPNNDSGLSRMWYDDTPYIYGSATGVTNQATKDEKIDYKTLPESIAPVDIYSTSRSMGGDKNMNMGYNLTWIFQVDPNSMYLTRLHFCEYHYSRLNQIVFKIFINNRTAETAADVIGWSGGKGVPTYKDYVLYVRDRPGDDQLWLALHPANESKPEFYDALLNGVEVFKLNDTDLSGPNPQPSDLLIQYERKANTFHSKHETNRTFVISTAGGAAGFALVALIIVAARQKKKKRTPGTYSATSSWLPLYGHSQTAGTKSTVSGKSVGHANLTAMAQGLCRFFSLQDMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAVKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGDEMCLVYDYMALGTMREHLYKGTKPLDLLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPNLPKEQVSLAEWALYNIRRGTLEDIIDPSIKGKMNPESLTKFADAAQKCVSDLGFERPSMNDLLWNLEFALNLEKSTDGSAALDHEGEFSEVSLEDNTNNRAAHYKNLSLESEKGLSQDPSNDNSAVIFSQIANPSGR	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun7g02229	865	Gene3D	Phosphorylase Kinase; domain 1	483	597	-	-
	Viun7g02229	865	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	644	656	IPR008271	GO:0004672\|GO:0006468
	Viun7g02229	865	CDD	STKc_IRAK	528	795	-	-
	Viun7g02229	865	ProSiteProfiles	Protein kinase domain profile.	522	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Viun7g02229	865	Pfam	Malectin-like domain	36	397	IPR024788	-
	Viun7g02229	865	PANTHER	OS07G0166700 PROTEIN	507	801	IPR045272	GO:0004714\|GO:0006468
	Viun7g02229	865	SUPERFAMILY	Protein kinase-like (PK-like)	501	797	IPR011009	-
	Viun7g02229	865	FunFam	FERONIA receptor-like kinase	213	399	-	-
	Viun7g02229	865	MobiDBLite	consensus disorder prediction	838	865	-	-
	Viun7g02229	865	FunFam	Receptor-like protein kinase FERONIA	598	811	-	-
	Viun7g02229	865	Gene3D	-	213	399	-	-
	Viun7g02229	865	Gene3D	-	34	192	-	-
	Viun7g02229	865	ProSitePatterns	Protein kinases ATP-binding region signature.	528	550	IPR017441	GO:0005524
	Viun7g02229	865	FunFam	FERONIA receptor-like kinase	32	192	-	-
	Viun7g02229	865	Pfam	Protein tyrosine and serine/threonine kinase	526	735	IPR001245	GO:0004672\|GO:0006468
	Viun7g02229	865	Gene3D	Transferase(Phosphotransferase) domain 1	598	814	-	-
	Viun7g02229	865	FunFam	receptor-like protein kinase FERONIA	485	597	-	-
	Viun7g02229	865	SMART	serkin_6	522	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun7g02229	Viun-Chr7	26705943	26709076	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun7g02229	23	865	Receptor kinase-like Gene Family	AT3G51550	51.078	0.0	839

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Viun7g02229		Malectin_like	3.5e-39	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun7g02229	-		-	gmx:100791236	1375.53