Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02210 ATGCTATTGCTGATTTTAATTTACAGTGAGCACAGGAAAGAAGAGGTAAAGAAGAGAGAAGTGTCAACACAAAACACAAACACAAACATGTTCGATGGAGTACCTGACCAGTTCCACCAATTCATAACTCCAAGGACCTCACTGCCCCTTCACTTACCTTTCCCTCTTCATGCTTCTGGCACCCCCAATACCACCTTCCCTTCCAATTTTGATCCCTATAACCCTCATCAACTCCCACTCCAACCCAACACTCTCTTGCACCCTTTCCCTCCTCACAAAGATGAACACCACAAGGACCAAAACAACACTGTCCCAATGAACTTCCAAATCCAAAGAGATCAACGCCACCAGCAACTGCCCCAGCTCATTGATCCCTGGACCAACGACGAACTCCTTGCGCTCTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAGCTGGCAGAGCTTGGATATAAAAGGAGTGCAGAGAAGTGCAAGGAGAAATTTGAAGAAGAAAGTAGATACTTCAACAACAACATTAATTACGGCAAGAATAACAACAATTATCGCTTCCTCAGTGAGCTTGAACAGCTTTACCATCAAGGGGGTGCTGATCATCTCGGGACCCAAGAAAAGACCCAGCAACACAAACAAGACAAGATGGACCACCATCCCTTGGAAGAAGGGGATTCTGGAAAACTTGAGGCGCCGGTCACAAAACAAACCCACGATGTTGATGATGATGCTGCAGCGGAAAAGAATCAGGGACGCAAGAGAAAGAGGCCCGGTAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGCACAGCAAGAAGAGATGCACAACAAGCTCCTCGAGGACATGATGAAGAGAGATGAAGAGAAGTTCACGAGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTCGAGATGATGGCTCGTGAACAAGCCATTGCAGGTGATAGACAGACCAACATTATTCAAATACTGAACAAATTCTCAGTCCCTCCTGCTTCAAACAAGAGTCTCAAGGTAGTAAGCAATGGTTCAAACCTAAAATCTCACACTACGAAAAACCCTAATCCTTCACAAAACATCCCAGCTACAACAGAAAACCCTACCTCCAGTCTTGCACAAGACACATTACAACTTATTACGAATCCTTCTACTTCTTCCTCTTCAGTTCAGGTTCCTCAGCCCAACCCTAGTTCTTCCTCTCTAAATAGCCAGAATAACATAAACCCAGCAGAGAGAAATTCAGTTTTGAATAAAAGCTTGTCACCAAACGTTGGTGGTGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTAGCACTGATAAACCTGAGGTGCAGCAGTGTGAGCAACAACAGCAACAGCAATGAGGAGAAGGAAGGGAACAAGGTGCCTCTGTGGGAGAGAATCTCACAAGGGATGTCGGAGTTAGGATACAGGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGTTAACAAGAAGAGGTCCCTTGACTCAAGGACTTGTCCCTACTTTCATCAATTGAGCAGTCTCTATAATGAAGGAAAACTTGTTCTACAATCCGAAAAACCAGAAAGCCACACGAATAATCCACCTGAGAATAATCTGGAGCAAGTGCAACCAGATCAAACACGAGCCGAGTCTTCTTCTCAAGTGGGGTCTGGTGGTTTCAGTGTGCAGCAGCAGGTTGATCATGGAGGTGAGAAAACCTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAA 1854 0.4498 MLLLILIYSEHRKEEVKKREVSTQNTNTNMFDGVPDQFHQFITPRTSLPLHLPFPLHASGTPNTTFPSNFDPYNPHQLPLQPNTLLHPFPPHKDEHHKDQNNTVPMNFQIQRDQRHQQLPQLIDPWTNDELLALLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNNNNYRFLSELEQLYHQGGADHLGTQEKTQQHKQDKMDHHPLEEGDSGKLEAPVTKQTHDVDDDAAAEKNQGRKRKRPGRFEMFKGFCESIVHKMMAQQEEMHNKLLEDMMKRDEEKFTREEAWKKQEMEKMNKELEMMAREQAIAGDRQTNIIQILNKFSVPPASNKSLKVVSNGSNLKSHTTKNPNPSQNIPATTENPTSSLAQDTLQLITNPSTSSSSVQVPQPNPSSSSLNSQNNINPAERNSVLNKSLSPNVGGEKDDVGRRWPKDEVLALINLRCSSVSNNSNSNEEKEGNKVPLWERISQGMSELGYRRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNEGKLVLQSEKPESHTNNPPENNLEQVQPDQTRAESSSQVGSGGFSVQQQVDHGGEKTLMQVPSLDFDQF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02210 617 Pfam Myb/SANT-like DNA-binding domain 124 202 IPR044822 -
Viun7g02210 617 Pfam Myb/SANT-like DNA-binding domain 454 545 IPR044822 -
Viun7g02210 617 ProSiteProfiles Myb-like domain profile. 125 177 IPR001005 -
Viun7g02210 617 Gene3D - 456 522 - -
Viun7g02210 617 Gene3D - 126 182 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 556 602 - -
Viun7g02210 617 FunFam Trihelix transcription factor GT-2 126 182 - -
Viun7g02210 617 CDD GT1 454 524 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 403 453 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 354 391 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 556 617 - -
Viun7g02210 617 PANTHER FI21293P1 96 604 - -
Viun7g02210 617 ProSiteProfiles Myb-like domain profile. 455 517 IPR001005 -
Viun7g02210 617 MobiDBLite consensus disorder prediction 214 266 - -
Viun7g02210 617 FunFam Trihelix transcription factor GTL2 456 522 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 403 442 - -
Viun7g02210 617 Coils Coil 285 305 - -
Viun7g02210 617 MobiDBLite consensus disorder prediction 212 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02210 Viun-Chr7 26548139 26550861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02210 30 549 Trihelix Transcription Factor Family AT5G28300 41.455 5.85e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g02210 Myb_DNA-bind_4 5.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02210 - - gmx:100804367 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02210 7 26548139 26550861 Viun7g02210 7 26548139 26550861 ECH
Viun6g01610 6 24012868 24015428 Viun7g02210 7 26548139 26550861 PCT