Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02209 ATGGCGGATTCTTCAAGCAACTCCAAGGATAAGAACAACACGCGCCTCTACCATCCCTACCAGGACCTCAACGTGCCAATCCAAAAGCTCTATAACCTCCCCACCGCACCGGAGCACCTCTTCTCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCACCGCCTACCTCTCAGGTGCAATCATCGGCGCCGCCAGAGGCACCGTCCAGGGCCTCCGCGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGTCTCAACCGAATCCTCAACTCGGGTGGCCACGCGGGCCGCAAACTCGGCAACTCGCTCGGCGTCCTGGGCCTCATCTTCGCCGGCCTCGAGAGTGGGATGATCCACGCCAGGGGCACCGATGACTTAGTCAACAGCGCCATCGCTGGACTCGGCACCGGAGCACTCTACAGGGCCGCCGCCGGACCTCGATCCGCCGCCATTGCCGGCGCAATCGGAGGGATCGCCGCCGCCGTGGCGGTTGGAGGGAAGCAGGCTTTGAAGAGATACATACCAATCTAG 555 0.6324 MADSSSNSKDKNNTRLYHPYQDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGAARGTVQGLREAESGDSLKIRLNRILNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDLVNSAIAGLGTGALYRAAAGPRSAAIAGAIGGIAAAVAVGGKQALKRYIPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02209 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Viun7g02209 184 PANTHER TIM23 26 171 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02209 Viun-Chr7 26542924 26543819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02209 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 55.914 4.87e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02209 K17794 - gmx:100779163 290.041