Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02202 ATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTCGGAAAAGGAGCTTCAAAGACAGTATATAGGGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTATTGTGAAATTCACCTCCTCAAAACATTGAAGCACAGGAACATTATGAAATTCTACACTTCTTGGGTTGATACTGCGAATAGGAATATCAACTTCGTGACTGAAATGTTCACCTCCGGTACACTCAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAGTGGACTTCTCTATCTTCATAGTCACGATCCGCCTGTGATCCATAGAGATCTAAAATGTGATAACATTTTTGTCAATGGAAACCAAGGGGAAGTGAAAATTGGGGATCTTGGTTTGGCAGCAATTCTCCGGAAATCTCATGCAGCTCATTGTGTAGGGACGCCCGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATATAATGAGCTAGTTGACATCTATTCCTTTGGGATGTGCATACTAGAGATGGTCACGTTCGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATATATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTATATAGAGTGAAGGATCCGGAGGTGCGACAATTTGTTGAAAAATGCTTGGCCACAGTGTCTCTTAGGCTTTCTGCAAGGGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTATGAATATGATATGAGAGCTGTAGAAAATGCAGAATTGGATGAATTTGGTTCTCTCATCAGACAACCATTCTTTGATCTTCATCGAAGCTACAGTAACTTCAGTACTGAATACTCAAACGGCTTCGGGTATGAAGGAGACTGGTGTCCTCATCCGGCAGAGATTGAACCAAGTGGAATTGAACTTTTTGAGTACCATGATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGGAATATTTATTTCCCTTTTGACATAGAGACGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTCGACATTACGGACCAGGATGTTACCAGAATAGCTGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAATCAAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGGTAGAGGGGATCTGA 1440 0.4215 MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDMRAVENAELDEFGSLIRQPFFDLHRSYSNFSTEYSNGFGYEGDWCPHPAEIEPSGIELFEYHDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIETDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGMDVLQCMGGLRRLPSNLKSMTTMVEGI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02202 479 FunFam probable serine/threonine-protein kinase WNK9 371 453 - -
Viun7g02202 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Viun7g02202 479 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Viun7g02202 479 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Viun7g02202 479 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Viun7g02202 479 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Viun7g02202 479 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Viun7g02202 479 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 438 - -
Viun7g02202 479 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02202 479 Gene3D - 371 436 - -
Viun7g02202 479 CDD STKc_WNK 22 281 - -
Viun7g02202 479 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02202 479 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Viun7g02202 479 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02202 Viun-Chr7 26479411 26482624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02202 1 437 MAP Kinase Kinase Kinase AT3G22420 63.694 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun7g02202 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02202 K08867 - gmx:100775959 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02202 7 26479411 26482624 Viun7g02202 7 26479411 26482624 ECH
Viun6g01604 6 23952942 23956189 Viun7g02202 7 26479411 26482624 PCT