Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02193 ATGCCCATGGCATCCGATCTAAACGACGCCGTTTTCCCTGAAGAAGATCTCGATGACGACGACGAAACACAAGAGGACGAAGAGGAGGAGGACGAAGACGACGACGTTTTAGACGATGAAGAAACCGAACCCTCTCACTCCGTCCTCGCAGCCATAACCCTGGCTGCCCCCGGTTCCGCCGTCTCCCAAACACTCGGCACCGCGTCAACTGCTATCGTTGTCGCCGATTCCTCGCCGAAGAGGCCGCGCACGGAGCAAGTCGAGGAGAAAAAGGCGCTGGACGATTCGCGGCGATTGTTCCAGCGTCTGTGGACGGACGAGGACGAAATTGGGCTCTTGCAGGGGTTTCTTGACTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCCTTGTTCTACGACCAGATCAAGTCGAAGCTTCAACTCGGTTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCATCACCAAAATCAACGATGGCAAGGAATTCTCCTTCAAGAGCCCTCACGACAGGGCCACCTTCGAAATCTCGCGGAGGATCTGGAGCAACGCCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATCCCAATCCCAACCCTAATTTCGGCCATTCGGCGAAGACGTCGCTCTCGCGGAAGCGGTCGCGGCCTCGATCGGAGAAGCGTGAGTTCCACGACGGTTCAGCGTTGAACAAGGATACTAATGGTATTGGCAATAGTAACAATAATAGCAACAAAGATAATGAAAATTATAACCACAAGCATAGCTTACAGGGCTTGATTGAAGAGACGGTGAGGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGTGAATGGTGGCATGGGATTGGGAAGTGGTTTTGGTTTTGGGGGAAGAGGTTTTGGAGTTGGAGGAGGGTTTCCTTTGAATCCCTTGCAAATGCCAATGGCGTTGAGTTCATTGAATTTGGGCATTGGGGAAATGGTGACGGATGAGAAGTGGAGGAGGCAACAGATTTTGGAGCTGGAAGTGTATTCTAAGCGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTCTCGAGGAGTTACGATCAGCCGGTGGAGGATGA 1146 0.5288 MPMASDLNDAVFPEEDLDDDDETQEDEEEEDEDDDVLDDEETEPSHSVLAAITLAAPGSAVSQTLGTASTAIVVADSSPKRPRTEQVEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVITKINDGKEFSFKSPHDRATFEISRRIWSNAAPITGPVEDDDEINPNPNPNPNPNFGHSAKTSLSRKRSRPRSEKREFHDGSALNKDTNGIGNSNNNSNKDNENYNHKHSLQGLIEETVRSCVSPVLKELVNGGMGLGSGFGFGGRGFGVGGGFPLNPLQMPMALSSLNLGIGEMVTDEKWRRQQILELEVYSKRLELVQNEIKVALEELRSAGGG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02193 381 MobiDBLite consensus disorder prediction 11 41 - -
Viun7g02193 381 Pfam Protein of unknown function, DUF573 100 194 IPR007592 GO:0006355
Viun7g02193 381 PANTHER BNAANNG10740D PROTEIN-RELATED 5 374 IPR007592 GO:0006355
Viun7g02193 381 MobiDBLite consensus disorder prediction 1 48 - -
Viun7g02193 381 MobiDBLite consensus disorder prediction 251 266 - -
Viun7g02193 381 Coils Coil 148 168 - -
Viun7g02193 381 Coils Coil 354 374 - -
Viun7g02193 381 MobiDBLite consensus disorder prediction 197 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02193 Viun-Chr7 26432787 26434389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02193 3 381 GeBP Transcription Factor Family AT5G28040 45.080 2.21e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Viun7g02193 DUF573 1.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02193 - - gmx:100817182 440.269