Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02176 ATGGCTTTTTCTCACGACTTGGAGGAGGAATCCTCTTCGCCCCCTCTCGTGTTTCACGTGCGGAGGAGCGAACCGGAGCTGGTGGCTCCGGCCAAGCCCACTCCCCGCGAAACCAAACTGCTATCAGACATAGACACCCAAGCGGGCCTCCGAACCCAAATTCCAATCATACAGTTCTACAGAAACGACCCATCAATGGCAGGGAAGGATCCGGTTGAAGCCATTAGACACGCTCTCGCCGAAACCCTAGTTTTCTACTACCCGTTGGCTGGAAGGATTAAGGACGGTCCTGACGGAAGCCTGGTGGTGGATTGCAACGAGGAGGGTGTGATGTTCATCGAGGCCGACGCTGATGTCACACTCCACCAATTCGGTCACACTCTTAAACCCCCTTTCCCGTGCTTCCAACAACTCCTTTACCAACCTCCCGGTTCGGAAGCTGTAACTCATACACCCCTTTTTATTATACAGGTGACGCGTTTGAAGTGCGGTGGTTTCATCTTGGCGCTCCGTTTCAACCACGCCATAGTCGACGGAGTTGGCCTGATTCAGTTCACAATTACCATGGCAGGGATAGCTCGAGGAGTCTTTCAAGAACCTCCATTCAAACCTGTGTGGCGCAGGGACCTTCTCAGTGCCAGGGATCCGCCACGTGTCACATTCAACCATCGCGAGTACGAGCAACTCACAGACTCCAACGACGCCGTTCTAGAGAGCTTCGAGCAACGGTCATTCTTCTTCGGCCCGGCCGAAACTGCCGCCATCCGCGCCCTCCTCCCCCATGACCTCGACCAGCACACCACCACCTTCGAGGTGCTGACGTCTTACGTCTGGCGCTGCCGTACAAGAGCGCTTCAGATCAATCCTGATGAGGACGTTCGGATGATGTGCATCGTGGATGCGCGCGACAAGTTCAAGTCGTCCTTACTGACGGGTTATTACGGTAGCTGCTTTGCGTTTCCGGCAGCTGTGGCCGCTGCCGGAGAGCTTTGCTCGGAGCCGTTGGAGTATGCGGTGAGGCTGATACAGAAGGCGAGGGGCGAGGTGAGCGAGGAGTATGTTCACTCTGTGGCGGATCTGATGGTGAGTTCGGGAAGACCTTTGTTTACTGTCGTGAGGTCGTGTCTGGTTTTGGATACGACGGAGGCTGGATTTAGAGATTTGGATTTTGGGTGGGGGAAGGCGCTGTATGGAGGAATGGCTGTTGCTGGTGCAGGGATGTTTCCTGCAGTGAACTTTCATGTTCCGAGTCAGAACGCGAAGGGAGAGGAAGGGATTCTGGTTTTGGTTTCCTTGCCTTCACAAGTTATGAAAATCTTTGCCAATGAGTTGGATGACAATTTGGTTCAGAACAACACAACAATTTAG 1368 0.5387 MAFSHDLEEESSSPPLVFHVRRSEPELVAPAKPTPRETKLLSDIDTQAGLRTQIPIIQFYRNDPSMAGKDPVEAIRHALAETLVFYYPLAGRIKDGPDGSLVVDCNEEGVMFIEADADVTLHQFGHTLKPPFPCFQQLLYQPPGSEAVTHTPLFIIQVTRLKCGGFILALRFNHAIVDGVGLIQFTITMAGIARGVFQEPPFKPVWRRDLLSARDPPRVTFNHREYEQLTDSNDAVLESFEQRSFFFGPAETAAIRALLPHDLDQHTTTFEVLTSYVWRCRTRALQINPDEDVRMMCIVDARDKFKSSLLTGYYGSCFAFPAAVAAAGELCSEPLEYAVRLIQKARGEVSEEYVHSVADLMVSSGRPLFTVVRSCLVLDTTEAGFRDLDFGWGKALYGGMAVAGAGMFPAVNFHVPSQNAKGEEGILVLVSLPSQVMKIFANELDDNLVQNNTTI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02176 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 441 - -
Viun7g02176 455 Gene3D - 224 443 IPR023213 -
Viun7g02176 455 Gene3D - 16 223 IPR023213 -
Viun7g02176 455 Pfam Transferase family 19 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02176 Viun-Chr7 26383248 26385051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02176 27 444 Monolignol Biosynthesis Gene Families AT5G48930 29.263 1.22e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02176 K19861 - gmx:100820325 744.577