Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02166 ATGAGTGAGAGAGTGAAGAAGGAAAAGCCAACGGGGGAGAAAAGAGAGAGGATGAAGAACATCTTCAAGAAGCTTCATATAGGTGGCAACCACGATCCTCAGCGATCCAATGACAATTCGCCACCTGTGCCGTCGCCGTCATGCGCCGCCGATCAGTCTCAAAGCTCCGGCGCCGCTCCTGCGAGTCCCTCGTCGGCCTCGGCCACGGCGTCGGCCTCCACCGCCTTGGTTTCTCCCGGCGGAGGCGTGAGTCCGGTGGTGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTCCGCGACGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTGTTGAGTCTAGGAGGGCTTCGAATCGATTCGGCGAGGAACAAGGACGATGCGGCCGAGGCGCTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATACGGGCCCTCTAATGATTCAGTGATGCAAGGAAAGATGCCATCTCGAATGGATCTTGAAGCAAATCCTGGAGGTTCTGAGGTGGTCATTGTTAATAGAACAATTGATCCTGCACTTGAAGAACTGATACAAATTGCACAATGTATTGCATTAGACTGCCCGGTCACTAGTTTGGCACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCGGAGTTAAGGACAAATCTTCACACAATTGTATTGCCTCTCGGGTCCTTAAATATTGGGCTCTCTAGACATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTGGAGGATGATGCTGTCAACATTATAAAGTTGGAGGGTGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCACTTATGCCAGCTGATATTTTGAGCACCAAGGATAGTGCCTTTAACAAGGCTTTTAATCCCAAGATTTTACCCAATTTACCTTCCTCCAAGGATAAGGAGTTTTCTTACTCAAGACCTATCCAACCATCTCCTGGTGAAGGTAGTAGTCAAAATTCTGTGATAAAAGATCATGCACTGCGTTGGAATGGAAAATCATATTTTGAGAAGTCAGAGCCTTCAAACATAGGTTTGAGAAGGGACACTGGCGTTGGTCCTTCTAAAACTTCTAATAGAGGGACCCCTAATCAACCGGAGAATTTGCCTGCTCTGTCTGGTACTTCTCTGTACAAAGGGACCCTCGGAATGAATACAATTGGTGATGGGACGAGACTTAATGTCAATGTTGTACCATATACTCAAAACAGCTCCAATGACTCTCGAAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGGGCTTAACAAACCCGTAGAAATTAAACCTAATAACACTGTTTCTGGTCGGCCCCCAGTACTACTGACGAAGAAGAACCGTCATGCCTACAATGAAGACCCCAGGAAAACTAATTATAACCCTAATGAGTACAAACCTCCCTTGTTTGTTTCCAATGGTTCTTCTACATCTGAAAATGTTGACCATAGTTCCAAACCATTATATAATTCAAATTTAAATAATGATGTAAATGTTCAAACTTTGGCACATGTTACTGGTTCAGTTTCATCATCTGTACCTGAACTGAACCAGATTGAGGATCTCAATGCTGATTTTGGCCAGGGGGGTCTGGAAAATTCTCAAAACTTCATGGTGGAGGCAGTTAGAGAACCTGATAATGCCGAAATCAGACATCACGACCGGAGGAAGCATACTTATGACAGATTCCTGGGAAACAATTTCAAACTAAAGGAACCAGAGAGTCCTAGCTCATCAATTGATTCCATCACAAACAGGGTGGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTTTTTCTTGGTGAAAGAATTGGTATAGGTTCATACGGTGAGGTATACCATGCCGACATGAATGGCACAGAGGTTGCTGTAAAGAAATTTTTGGATCAGGACTTTTCAGGTGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGTTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCTAATCTCTCAATCATTTCAGAGTATTTACCAAGAGGAAGCTTGTACAGATTACTTCATCGCCCTAATTGTCAGATCGATGAGAAACGAAGAATAAAAATGGCTTTGGACGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTATAATTGTTCACCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAGTGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAAAAATGCGATGTTTATAGTTTTGGAGTCATCCTATGGGAACTTGCTACATTAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTTGGTTTCCAAAATCGTAGACTTGAAATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCACAACTGACAGTGGCTCTAAAGCCTCTTCAGCGTCTGGTTATCCCATCGCATCAAGACCAGGTACCTCCACTCGTGCCGCAGGAGATTTCTGTAAATTCCACCCCATGA 2895 0.4453 MSERVKKEKPTGEKRERMKNIFKKLHIGGNHDPQRSNDNSPPVPSPSCAADQSQSSGAAPASPSSASATASASTALVSPGGGVSPVVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHAATLLSLGGLRIDSARNKDDAAEALSRQYWEYNVLDYEEKVVDGFYDVYGPSNDSVMQGKMPSRMDLEANPGGSEVVIVNRTIDPALEELIQIAQCIALDCPVTSLAQRLAELVTSHMGGPVKDASIMLARWTETRAELRTNLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDLMAAPGTLIPLMPADILSTKDSAFNKAFNPKILPNLPSSKDKEFSYSRPIQPSPGEGSSQNSVIKDHALRWNGKSYFEKSEPSNIGLRRDTGVGPSKTSNRGTPNQPENLPALSGTSLYKGTLGMNTIGDGTRLNVNVVPYTQNSSNDSRNLFADLNPFQIKGMGKASGLNKPVEIKPNNTVSGRPPVLLTKKNRHAYNEDPRKTNYNPNEYKPPLFVSNGSSTSENVDHSSKPLYNSNLNNDVNVQTLAHVTGSVSSSVPELNQIEDLNADFGQGGLENSQNFMVEAVREPDNAEIRHHDRRKHTYDRFLGNNFKLKEPESPSSSIDSITNRVDQILDDVDVGECEIPWEDLFLGERIGIGSYGEVYHADMNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRLLHRPNCQIDEKRRIKMALDVARGMNCLHTSTPIIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVPPLVPQEISVNSTP 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02166 964 Gene3D Transferase(Phosphotransferase) domain 1 762 944 - -
Viun7g02166 964 CDD STKc_MAP3K-like 689 932 - -
Viun7g02166 964 Pfam Protein tyrosine and serine/threonine kinase 685 933 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 MobiDBLite consensus disorder prediction 1 68 - -
Viun7g02166 964 ProSiteProfiles Protein kinase domain profile. 683 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02166 964 Gene3D Phosphorylase Kinase; domain 1 676 760 - -
Viun7g02166 964 MobiDBLite consensus disorder prediction 498 517 - -
Viun7g02166 964 MobiDBLite consensus disorder prediction 1 31 - -
Viun7g02166 964 FunFam Serine/threonine-protein kinase isoform 1 674 761 - -
Viun7g02166 964 MobiDBLite consensus disorder prediction 32 68 - -
Viun7g02166 964 Pfam Ethylene-responsive protein kinase Le-CTR1 146 339 - -
Viun7g02166 964 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Viun7g02166 964 FunFam Serine/threonine-protein kinase CTR1 762 945 - -
Viun7g02166 964 PRINTS Tyrosine kinase catalytic domain signature 843 853 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 PRINTS Tyrosine kinase catalytic domain signature 757 770 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 PRINTS Tyrosine kinase catalytic domain signature 906 928 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 PRINTS Tyrosine kinase catalytic domain signature 862 884 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 PRINTS Tyrosine kinase catalytic domain signature 796 814 IPR001245 GO:0004672|GO:0006468
Viun7g02166 964 MobiDBLite consensus disorder prediction 370 392 - -
Viun7g02166 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Viun7g02166 964 MobiDBLite consensus disorder prediction 369 392 - -
Viun7g02166 964 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 939 - -
Viun7g02166 964 MobiDBLite consensus disorder prediction 410 447 - -
Viun7g02166 964 SMART serkin_6 683 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02166 964 MobiDBLite consensus disorder prediction 423 447 - -
Viun7g02166 964 SUPERFAMILY Protein kinase-like (PK-like) 673 954 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02166 Viun-Chr7 26243162 26251913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02166 18 919 MAP Kinase Kinase Kinase AT1G08720 55.957 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun7g02166 PK_Tyr_Ser-Thr 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02166 - - gmx:100818780 1644.4