Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02160 ATGGTCTTTGAAATCAGTTCTGTTGTTTCAAAATTACAAATGGTATCCACTTCGGACCATGCCTCCGTTGTCTCCATGAACTTATTTGTGGCTCTTCTCTGTGCTTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCTATCACTGCCCTTATGATTGGTATTTCCACCGGCGTAATCATTTTGCTGTTTAGTGGTGGTAAAAGCTCACATATTCTTGTTTTCAGTGAAGATCTTTTCTTCATATACCTTCTGCCGCCTATAATATTCAATGCTGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTCATGACCATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTGCTGTCATAACTTTGGGTGCATCGCAAATTTTTGAGAAGTTGGATATTGGTCCACTGGAATTAGGGGATTACCTAGCAATTGGTGCAATATTTGCTGCGACAGATTCTGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTGCTGTACAGTCTTGTATTTGGGGAAGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACCACATAGACCCTTCAATAGCTTTGCACTTTTTGGGCAATTTCTTGTATTTATTTGTCGCAAGCACAATGCTTGGAGTGTTGACAGGTCTACTCAGTGCTTATATTATCAAAAAGCTGTATATTGGAAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGTTAATGGCTTACCTATCCTACATGCTAGCTGAACTATGCTATCTAAGTGGCATCCTCACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACCTGGCATAATGTGACTGAGAGTTCAAGAATCACTACCAAGCATTCTTTTGCAACCTTGTCATTTGTTGCCGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTCGTCAGTGATAGTCCTGGAACATCTATTGCAGCTAGTTCAGTATTGTTGGGCCTAATTCTTGTTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTTATATCCAACTTGGCTAAAAAATCACCAAATGAGAAAATTAGCTTCAGACAGCAAGTGATTATTTGGTGGGCAGGTCTTATGAGGGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACCATGTCGGGGCATACTTCACTACGAAGCAATGCAGTCATGATCACTAGCACCATCACTGTTGTACTTGTCAGCACGGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGCTTTTACTACCTCATACTCCAAATCATAAAGAAATAAACATCGTGATAGCTACAGATACATCTACTCCAAAATCAGCCACTGTCCCACTTCTTGGGAGTGCTCAAGACTCTGAAGTCGATATTGATCCAATCCATCGTCCAAGCAGCATCCGTGCATTGCTTAGAACTCCAACGCACACTGTTCATCGTTTGTGGCGTAAGTTCGATGATGCATTCATGCGTCCTGTTTTCGGTGGAAGGGGTTTTGTTCCTGTAGAACCTGGTTCTCCATCTGAACGTAATGGTCATCAATGGCGTTGA 1629 0.4113 MVFEISSVVSKLQMVSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALMIGISTGVIILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCAVITLGASQIFEKLDIGPLELGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNHIDPSIALHFLGNFLYLFVASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSIAASSVLLGLILVGRAAFVFPLSFISNLAKKSPNEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTSLRSNAVMITSTITVVLVSTVVFGLMTKPLIRLLLPHTPNHKEINIVIATDTSTPKSATVPLLGSAQDSEVDIDPIHRPSSIRALLRTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPSERNGHQWR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02160 542 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun7g02160 542 NCBIfam sodium/hydrogen exchanger 3 25 451 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun7g02160 542 Gene3D - 146 197 - -
Viun7g02160 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun7g02160 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun7g02160 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun7g02160 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun7g02160 542 PANTHER SODIUM/HYDROGEN EXCHANGER 16 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02160 Viun-Chr7 26171017 26177266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02160 6 540 Antiporters AT3G05030 76.438 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02160 - - gmx:100816746 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02160 7 26171017 26177266 Viun7g02160 7 26171017 26177266 ECH
Viun6g01574 6 23686860 23691513 Viun7g02160 7 26171017 26177266 PCT