Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02153 ATGGAGTGCAACAAGGACGAGGCTTTGAGGGCTAGAGAAATTGCTGAAGCTAGAATGCAAAGAGGTGAATTTCAAGCGGCTCTCAAGTTTGCTACCAAGGCCAAAAACCTTTATGCGGATGTGGAAAACATCAGCCATGTTCTTACGATTTGTGAGGTTCACAATGCTGCACAGACACAACTCTCTCCCACTGAAATGGATTGGTATGCGATTCTTCAGATTGAAAGATTGGCGGATGAAACAGCCATAAAGAAACAGTACAAGAGGCTTGCACTCCTACTTCATCCTGATAAGAATAAGTTTGCTGGTGCAGAAACTGCTTTCAAATTGGTTGGGCAAGCCAATGGTGTTTTGAGTGACCAAGCAAAACGTTTTTTGTTTGACAAGAAGTTTGCTGTCTCTGTGAGAGGCCGCCCTGTGCCGAAATCCGCCGAGTCCAAGAAGAAAGCTGTCCCGAAGACATTCTGGACATGTTGCCAACATTGTAATACTAAATACCAGTTCTGCATGCCGTTTGTGAATGCAACCATACGCTGTAAACAGTGTTTAAAGTCATTTAAAGCTCGTGCTATTCCTTTGGAAAATATCCAGAAGGAGTATCCAACGCATGGTTCCCCAAAACCAGCCTCTGAAAGTACTGGTGGAAGAAACCCTGGTGGAGGAGAACATGGTAGTACGTTTGTGAGGCCAAATCCCATGTCTATGAAAAAATGTTCTTCTGGCGTTGGGGCTAATTCTGAAGGTGAAAAGAGTAAAGATGACTGTGTTCCTCCATCCACAGGCGCGGAGTCACAAACCTCTAAAAATGTTGGAAGTAAAAGAGTTAGGCAGTCAGCACCAGATTCAGGACTTGATGCAGGGAGATCTTGTAGACAAAAGCAACAGCATGTTTGA 894 0.443 MECNKDEALRAREIAEARMQRGEFQAALKFATKAKNLYADVENISHVLTICEVHNAAQTQLSPTEMDWYAILQIERLADETAIKKQYKRLALLLHPDKNKFAGAETAFKLVGQANGVLSDQAKRFLFDKKFAVSVRGRPVPKSAESKKKAVPKTFWTCCQHCNTKYQFCMPFVNATIRCKQCLKSFKARAIPLENIQKEYPTHGSPKPASESTGGRNPGGGEHGSTFVRPNPMSMKKCSSGVGANSEGEKSKDDCVPPSTGAESQTSKNVGSKRVRQSAPDSGLDAGRSCRQKQQHV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02153 297 Gene3D DnaJ domain 64 169 IPR036869 -
Viun7g02153 297 CDD DnaJ 67 120 IPR001623 -
Viun7g02153 297 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Viun7g02153 297 PANTHER BNAC03G44070D PROTEIN 1 251 - -
Viun7g02153 297 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Viun7g02153 297 MobiDBLite consensus disorder prediction 197 297 - -
Viun7g02153 297 Pfam DnaJ domain 67 128 IPR001623 -
Viun7g02153 297 MobiDBLite consensus disorder prediction 258 276 - -
Viun7g02153 297 SMART dnaj_3 66 123 IPR001623 -
Viun7g02153 297 PRINTS DnaJ domain signature 103 123 IPR001623 -
Viun7g02153 297 PRINTS DnaJ domain signature 87 102 IPR001623 -
Viun7g02153 297 PRINTS DnaJ domain signature 69 87 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02153 Viun-Chr7 26122081 26123667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02153 4 192 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.171 6.56e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02153 - - pvu:PHAVU_007G183700g 450.284