Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02126 ATGAAGAACTCAAGTGGCTCTAGAGAAAATGGAGGAATTTACCTTTTTCTCCTCCTCCTCATCGTTCCTCTTGCGGCTGCACAATCTCCTAACAACCAAAACGAATCGTATTACAACCGCTTCAGCCCTTCCATGGCCATCATAATCGTCATCCTCATCGCCGCCGTCTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCGCCGACACCCCCTCCGCCAGCATCCGCAACCTCACCGGAGCCACCGCCCGCCCCCGCCGCGGCCTCGACCAGGCGGTCATCGACACGTTCCCCACGCTCGAGTACTCCGTGGTGAAGATCCACAAGCTTGGAAAGGGGACGCTGGAGTGCGCGGTGTGCTTAAACGAGTTCGAAGACACCGAAACGCTGCGTTTGATCCCCAAGTGCGATCACGTGTTCCACCCGGAGTGCATCGACGAGTGGCTCGCCTCCCACACTACTTGCCCCGTTTGCCGCGCCAACCTCGTCCCCGAGCCCGGAGACTCCGTCAGGGGAATTCCAGTTCTCAATGCTCCGAACGACATCGAGGACCAATCCGAAGCCCAACCCGAGGCCCACGACGACGCCGTCGAGCCTCTTCCCGAACAGCAGCAAGAGCCTAAGCTTCCAATTTCCTCTGAACCCCCTCAATTGCTCAGCCTAAACCAGACGCTGAACCGGAACCGCACTAGAGGCTCCCGGTCGGGCCGCCCCCGCCGGTTCCCCCGCTCTCACTCGACCGGTCATTCGCTGATTCAACCCGGCGAGGACACTGAGCGGTTCACCTTGAGGCTTCCCGAGGAAGTTAGAAAACAGATACTTCTCAACCCGGAACTTCATCGAGCGAGAAGCTTGGTTATGTTGCCAAGGGAAGGTAGTTCGCGGCGTGGATATCGAACCGGCGAGGGAAGTAGCAGAGGGAGGTCTTCGCGGCGGTTGGACCAGGGCTTTAAGTCCGACCGCTGGGTTTTCACTATGGCGCCGCCCTTCTTAGTGAGGGCCTCTTCCGTTAGGTCGCCAAGGGTGGCCAATAACGGCGGCGCAGGAACATCAGCTGCTGCGCCCTTTCCGCCGCCGGCTGCTGTGGATTCTGTTTGA 1104 0.5924 MKNSSGSRENGGIYLFLLLLIVPLAAAQSPNNQNESYYNRFSPSMAIIIVILIAAVFLMGFFSIYIRHCADTPSASIRNLTGATARPRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEDQSEAQPEAHDDAVEPLPEQQQEPKLPISSEPPQLLSLNQTLNRNRTRGSRSGRPRRFPRSHSTGHSLIQPGEDTERFTLRLPEEVRKQILLNPELHRARSLVMLPREGSSRRGYRTGEGSSRGRSSRRLDQGFKSDRWVFTMAPPFLVRASSVRSPRVANNGGAGTSAAAPFPPPAAVDSV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02126 367 MobiDBLite consensus disorder prediction 337 367 - -
Viun7g02126 367 SMART ring_2 119 160 IPR001841 -
Viun7g02126 367 SUPERFAMILY RING/U-box 112 167 - -
Viun7g02126 367 MobiDBLite consensus disorder prediction 208 233 - -
Viun7g02126 367 MobiDBLite consensus disorder prediction 188 203 - -
Viun7g02126 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 166 IPR013083 -
Viun7g02126 367 FunFam E3 ubiquitin-protein ligase ATL6 79 167 - -
Viun7g02126 367 MobiDBLite consensus disorder prediction 297 316 - -
Viun7g02126 367 CDD RING-H2_EL5-like 118 161 - -
Viun7g02126 367 MobiDBLite consensus disorder prediction 292 316 - -
Viun7g02126 367 Pfam Ring finger domain 118 161 IPR001841 -
Viun7g02126 367 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Viun7g02126 367 MobiDBLite consensus disorder prediction 187 260 - -
Viun7g02126 367 PANTHER RING FINGER DOMAIN-CONTAINING 28 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02126 Viun-Chr7 25947479 25949304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02126 13 367 Rapid Response to Elicitors AT3G05200 46.409 7.20e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02126 K10664 - gmx:100810865 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02126 7 25947479 25949304 Viun7g02126 7 25947479 25949304 ECH
Viun6g01527 6 23349303 23350736 Viun7g02126 7 25947479 25949304 PCT