Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02096 ATGAGAGGGGGCTCAATGGCACCAACAAGGAAATCTAGAAGTGTTAATAAGCGGATTTCAAGTTCAAATGATCTTTCTCCTGAGAAAGATGGAGTTAGTTCAAACAAAAACAAGCAACGGAAGAAAAAGTTGACTGATAAACTGGGATCTCAGTGGAGCAAGGAAGAATTAGAGAGATTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTAGTGTTGTACGAAATAGAACCACTGAAACGGTAGAAGCTCTTTACAATATGAATAGGGCATACCTCTCTCTGCCAGAGGGCACGGCTTCTGTTGTTGGCCTCATAGCAATGATGACTGATCACTACAATGTCCTGGAAGAGAGTGACAGTGAAATGGAGAGCAATGATGCACTAGGATCTCGGAAATTTGTAAAACGAAAGCGGGAAAAAGTTCAGCTTAGTGTCTCTAAAGATCAGTCTCATTCAATTGCTGCCAGTGATGGTTGCCTCTCTTTATTGAAGAAGAGACGCTTAGATGGTATTGTGCCTCATGCTGTTGGTAAAAGGACTCCTCGCGTCCCAGTTTCTTATTCTTATAAGAAAGATTATACAGAAAATTATGTTTCGCCTTATAGAAGAAGCCTAAAGTCAACTACTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAGGCTGCACAGAGAGGAGGGTCTCCCCAAGTTTCTCAATCACCATGTAGAAGAGCAGAAAAAAAACCCTCACCTGTCCAGCGTTGGGAAAGAAAGCAGCAACTGTCAGAGACAGCTCGTGCCAAGTTACACAATCTTTCAGTGGATGAAGAGTTATTAGACGGTAGTATAGAAAGCAGGGGAGCTGACAATGGAGAATATGCAAGAGATAATAGTTCATTGATAGATATGGAGGGCACAGGAACAGTTGAAGTTCTTCAGAAAGGGGGGAAAATTTACAGAAAGAAAGAGAGAGTGAAAAATGTTGGAAACCATCAGCTTGATGATGGCGGGGAAGCATGCAGCGGCACTGAAGAAGGGCTTAGTTGTTCACTAAAGGAAATGGTTGATATTGAGGTTACTAATGAAAAGCTTGAAAAAATCTCTCCAAAAGGTGGGAGGAAACGGAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCAGACCTGTCTCTAATGATGCCAATATCTACAATAGATTCTGAATCATCTATCCAATTGAAGGGAGACAGGATTTCTACTGATAAAGATGGTAAGTCTGCTCTACCTGAAGGAACATTAACAAGCCATAAGAGACATAAACATAAACACAGTGTAGTGCCTGAAATTGAGGTTTCAACCTCCAAAAAGTCCAAGCTTGGAAAGGAATCAACAAAGGATACTAGCGTGCTTTCTGAATCAAAAGAACAACTTCCTTTTGCTGATGCAACATGGAAAAGAAAACGGAAGTCTGTGGTTTCGAAGGTTGCAAATGCAAAGCTTGATTCTTGTCCAACTGGTCCCTTGAAAGATGAGGCTTTAGATGACGAGAAAAAACCAGTAGTTAAAGGAAAACATGGTGATCAGGTTTTTACCCTACCAAAGCAATTGAAGACCGTTAAATCATCAGAGAGTTCCTTGTGTATTGATCAGAAAGATTTGACAGTACCAGTGGTGGAGACTCCACTTCTGAACGAAGTTAGTTTACCAACTAAACGAAGTAGACGGAAGATGAATTTACAGAGAACTTCCTCTGCTAAGGAAAAGTCTTCTGATTCCATATTGAAAAGTCAAGCTAACAAGCACTCTGCTCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTATGTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTGATGGAATACTTAAATCATGTCGGACTAGGGAATATCCCAAGGTTAACTCGTGTTGAGTGGAGTGTTGTTAGAGGTTCCCTTGGCAAACCTCGGCGGCTTTCTGAACATTTTCTTCGTGATGAAAGGCAAAAACTTGCAGAGTATCGGGAATCAGTGAGAAAGCATTATGCTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACTGATTTAGCTAGACCATTATGTGTTGGACAGAGAGTAATTGCTGTTCATCCAAAAACAAGAGAGATTCATGATGGTAGCGTGCTTACTGTTGATTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAGTTTGTAATGGACATTGATTGTATGCCTTTCAATCCATTAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGATGACAGAAAAGGATCTTTTATGCCTATAGAGCCACATATTAATGGAAATTCAAATTTTGGGGGGTGCGAAAATCATTCCTCACCTTTGAAGGCTATGGTTGCTACCGTCGATAACTTCTGTGCACAAGCAGGTTGTGTTCAACCATGTAAAGTAACACACCATCAAGCTAGGGAAGCTGACATACATGCACTTTCTGAACTAAAGCGTGCTCTAGATAAAAAGGAGACATTGTTGATGGAACTTCGAAGTTCAAATAGCGATATATTGGAAAACCAAAATGGCATAGAATGCTTAAACGATTCTGAGGTTTTCAAGAAGCATTATGCCACGGTACTGGTAGAGCTAAAGGAAGCCAGTGGGCAGGTTTCTGATGCAATGTTACAACTGAGGCAGCGCAATACCTACAGAGGAAACTCTCTGCCACCATGGATGAAGCCACAAGCAGGTTTTAGTGTTCATGACGATCTTCCCAATATGTTGGATGGTTCTCTTACACAAGAGATTGGGTCAACTGTTGTTCAAATTATTAAAGGATCCAGGTCAAGGGCACATGCAATGGTAGATGCTGCATTTAAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTCGTGAAGATTGGGCAAGCATTGGATTCTATTAATCATCAGCAGTTGGCCTCCAAGTCTAGGTTACCTGTGATCAGGTCTCAAGAGCAAGTGAACGCAAATGGCAGTTTCTATCACGTTAATAATTCAACTTGCAGTGTATCAGAGTCTATACTTAATGATCCATCTGGTGCAAAACTACATAATTATTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCACTTCATGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGACGTGGCTCAGATATTAGATTCTGCAGTTAGCAGCTTGCATCCATGCTGTCCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACACAGATTTTAGCTCTGATTCCTACTTGA 3393 0.4076 MRGGSMAPTRKSRSVNKRISSSNDLSPEKDGVSSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRMYGKDWKKVASVVRNRTTETVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSEMESNDALGSRKFVKRKREKVQLSVSKDQSHSIAASDGCLSLLKKRRLDGIVPHAVGKRTPRVPVSYSYKKDYTENYVSPYRRSLKSTTDANDDEVAHVVALALTEAAQRGGSPQVSQSPCRRAEKKPSPVQRWERKQQLSETARAKLHNLSVDEELLDGSIESRGADNGEYARDNSSLIDMEGTGTVEVLQKGGKIYRKKERVKNVGNHQLDDGGEACSGTEEGLSCSLKEMVDIEVTNEKLEKISPKGGRKRNKKLFFGDETPALNALQTLADLSLMMPISTIDSESSIQLKGDRISTDKDGKSALPEGTLTSHKRHKHKHSVVPEIEVSTSKKSKLGKESTKDTSVLSESKEQLPFADATWKRKRKSVVSKVANAKLDSCPTGPLKDEALDDEKKPVVKGKHGDQVFTLPKQLKTVKSSESSLCIDQKDLTVPVVETPLLNEVSLPTKRSRRKMNLQRTSSAKEKSSDSILKSQANKHSALKEKLSSCLSSNMVRRWFMFEWFYSAIDYPWFAKRELMEYLNHVGLGNIPRLTRVEWSVVRGSLGKPRRLSEHFLRDERQKLAEYRESVRKHYAELRTGIRDGLPTDLARPLCVGQRVIAVHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPFNPLDNMPEALRRHIDDRKGSFMPIEPHINGNSNFGGCENHSSPLKAMVATVDNFCAQAGCVQPCKVTHHQAREADIHALSELKRALDKKETLLMELRSSNSDILENQNGIECLNDSEVFKKHYATVLVELKEASGQVSDAMLQLRQRNTYRGNSLPPWMKPQAGFSVHDDLPNMLDGSLTQEIGSTVVQIIKGSRSRAHAMVDAAFKALSLTKEGEDAFVKIGQALDSINHQQLASKSRLPVIRSQEQVNANGSFYHVNNSTCSVSESILNDPSGAKLHNYSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVSSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02096 1130 CDD SANT 52 82 IPR001005 -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 449 474 - -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 9 30 - -
Viun7g02096 1130 SUPERFAMILY Homeodomain-like 46 95 IPR009057 -
Viun7g02096 1130 Gene3D - 6 104 - -
Viun7g02096 1130 SMART DIRP_2 631 732 IPR033471 -
Viun7g02096 1130 PANTHER LIN-9 6 1130 IPR010561 GO:0006351|GO:0017053
Viun7g02096 1130 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 82 IPR017930 -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 233 264 - -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 414 476 - -
Viun7g02096 1130 ProSiteProfiles Myb-like domain profile. 50 91 IPR001005 -
Viun7g02096 1130 SMART sant 48 96 IPR001005 -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 31 48 - -
Viun7g02096 1130 Pfam DIRP 630 731 IPR033471 -
Viun7g02096 1130 FunFam Protein ALWAYS EARLY 3 isoform A 8 104 - -
Viun7g02096 1130 ProSiteProfiles SANT domain profile. 47 84 IPR017884 -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 1 48 - -
Viun7g02096 1130 Coils Coil 850 870 - -
Viun7g02096 1130 Coils Coil 683 703 - -
Viun7g02096 1130 MobiDBLite consensus disorder prediction 574 601 - -
Viun7g02096 1130 Pfam Myb-like DNA-binding domain 50 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02096 Viun-Chr7 25740814 25754522 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g02096 DIRP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02096 - - gmx:100816217 1855.11