Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02094 ATGAGAGGGGGCTCAATGGCACCAACAAGGAAATCTAGAAGTGTTAATAAGCGGATTTCAAGTTCAAATGATCTTTCTCCTGAGAAAGATGGAGTTAGTTCAAACAAAAACAAGCAACGGAAGAAAAAGTTGACTGATAAACTGGGATCTCAGTGGAGCAAGGAAGAATTAGAGAGATTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTAGTGTTGTACGAAATAGAACCACTGAAACGGTAGAAGCTCTTTACAATATGAATAGGGCATACCTCTCTCTGCCAGAGGGCACGGCTTCTGTTGTTGGCCTCATAGCAATGATGACTGATCACTACAATGTCCTGGAAGAGAGTGACAGTGAAATGGAGAGCAATGATGCACTAGGATCTCGGAAATTTGTAAAACGAAAGCGGGAAAAAGTTCAGCTTAGTGTCTCTAAAGATCAGTCTCATTCAATTGCTGCCAGTGATGGTTGCCTCTCTTTATTGAAGAAGAGACGCTTAGATGGTATTGTGCCTCATGCTGTTGGTAAAAGGACTCCTCGCGTCCCAGTTTCTTATTCTTATAAGAAAGATTATACAGAAAATTATGTTTCGCCTTATAGAAGAAGCCTAAAGTCAACTACTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAGGCTGCACAGAGAGGAGGGTCTCCCCAAGTTTCTCAATCACCATGTAGAAGAGCAGAAAAAAAACCCTCACCTGTCCAGCGTTGGGAAAGAAAGCAACTGTCAGAGACAGCTCGTGCCAAGTTACACAATCTTTCAGTGGATGAAGAGTTATTAGACGGTAGTATAGAAAGCAGGGGAGCTGACAATGGAGAATATGCAAGAGATAATAGTTCATTGATAGATATGGAGGGCACAGGAACAGTTGAAGTTCTTCAGAAAGGGGGGAAAATTTACAGAAAGAAAGAGAGAGTGAAAAATGTTGGAAACCATCAGCTTGATGATGGCGGGGAAGCATGCAGCGGCACTGAAGAAGGGCTTAGTTGTTCACTAAAGGAAATGGTTGATATTGAGGTTACTAATGAAAAGCTTGAAAAAATCTCTCCAAAAGGTGGGAGGAAACGGAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCAGACCTGTCTCTAATGATGCCAATATCTACAATAGATTCTGAATCATCTATCCAATTGAAGGGAGACAGGATTTCTACTGATAAAGATGGTAAGTCTGCTCTACCTGAAGGAACATTAACAAGCCATAAGAGACATAAACATAAACACAGTGTAGTGCCTGAAATTGAGGTTTCAACCTCCAAAAAGTCCAAGCTTGGAAAGGAATCAACAAAGGATACTAGCGTGCTTTCTGAATCAAAAGAACAACTTCCTTTTGCTGATGCAACATGGAAAAGAAAACGGAAGTCTGTGGTTTCGAAGGTTGCAAATGCAAAGCTTGATTCTTGTCCAACTGGTCCCTTGAAAGATGAGGCTTTAGATGACGAGAAAAAACCAGTAGTTAAAGGAAAACATGGTGATCAGGTTTTTACCCTACCAAAGCAATTGAAGACCGTTAAATCATCAGAGAGTTCCTTGTGTATTGATCAGAAAGATTTGACAGTACCAGTGGTGGAGACTCCACTTCTGAACGAAGTTAGTTTACCAACTAAACGAAGTAGACGGAAGATGAATTTACAGAGAACTTCCTCTGCTAAGGAAAAGTCTTCTGATTCCATATTGAAAAGTCAAGCTAACAAGCACTCTGCTCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTATGTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTGATGGAATACTTAAATCATGTCGGACTAGGGAATATCCCAAGGTTAACTCGTGTTGAGTGGAGTGTTGTTAGAGGTTCCCTTGGCAAACCTCGGCGGCTTTCTGAACATTTTCTTCGTGATGAAAGGCAAAAACTTGCAGAGTATCGGGAATCAGTGAGAAAGCATTATGCTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACTGATTTAGCTAGACCATTATGTGTTGGACAGAGAGTAATTGCTGTTCATCCAAAAACAAGAGAGATTCATGATGGTAGCGTGCTTACTGTTGATTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAGTTTGTAATGGACATTGATTGTATGCCTTTCAATCCATTAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGATGACAGAAAAGGATCTTTTATGCCTATAGAGCCACATATTAATGGAAATTCAAATTTTGGGGGGTGCGAAAATCATTCCTCACCTTTGAAGGTACATACTTCATCAAGTGCTTTAGTAATGCATGGAAAGGCTATGGTTGCTACCGTCGATAACTTCTGTGCACAAGCAGGTTGTGTTCAACCATGTAAAGTAACACACCATCAAGCTAGGGAAGCTGACATACATGCACTTTCTGAACTAAAGCGTGCTCTAGATAAAAAGGAGACATTGTTGATGGAACTTCGAAGTTCAAATAGCGATATATTGGAAAACCAAAATGGCATAGAATGCTTAAACGATTCTGAGGTTTTCAAGAAGCATTATGCCACGGTACTGGTAGAGCTAAAGGAAGCCAGTGGGCAGGTTTCTGATGCAATGTTACAACTGAGGCAGCGCAATACCTACAGAGGAAACTCTCTGCCACCATGGATGAAGCCACAAGCAGGTTTTAGTGTTCATGACGATCTTCCCAATATGTTGGATGGTTCTCTTACACAAGAGATTGGGTCAACTGTTGTTCAAATTATTAAAGGATCCAGGTCAAGGGCACATGCAATGGTAGATGCTGCATTTAAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTCGTGAAGATTGGGCAAGCATTGGATTCTATTAATCATCAGCAGTTGGCCTCCAAGTCTAGGTTACCTGTGATCAGGTCTCAAGAGCAAGTGAACGCAAATGGCAGTTTCTATCACGTTAATAATTCAACTTGCAGTGTATCAGAGTCTATACTTAATGATCCATCTGGTGCAAAACTACATAATTATTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCACTTCATGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGACGTGGCTCAGATATTAGATTCTGCAGTTAGCAGCTTGCATCCATGCTGTCCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACACAGATTTTAGCTCTGATTCCTACTTGA 3429 0.4068 MRGGSMAPTRKSRSVNKRISSSNDLSPEKDGVSSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRMYGKDWKKVASVVRNRTTETVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSEMESNDALGSRKFVKRKREKVQLSVSKDQSHSIAASDGCLSLLKKRRLDGIVPHAVGKRTPRVPVSYSYKKDYTENYVSPYRRSLKSTTDANDDEVAHVVALALTEAAQRGGSPQVSQSPCRRAEKKPSPVQRWERKQLSETARAKLHNLSVDEELLDGSIESRGADNGEYARDNSSLIDMEGTGTVEVLQKGGKIYRKKERVKNVGNHQLDDGGEACSGTEEGLSCSLKEMVDIEVTNEKLEKISPKGGRKRNKKLFFGDETPALNALQTLADLSLMMPISTIDSESSIQLKGDRISTDKDGKSALPEGTLTSHKRHKHKHSVVPEIEVSTSKKSKLGKESTKDTSVLSESKEQLPFADATWKRKRKSVVSKVANAKLDSCPTGPLKDEALDDEKKPVVKGKHGDQVFTLPKQLKTVKSSESSLCIDQKDLTVPVVETPLLNEVSLPTKRSRRKMNLQRTSSAKEKSSDSILKSQANKHSALKEKLSSCLSSNMVRRWFMFEWFYSAIDYPWFAKRELMEYLNHVGLGNIPRLTRVEWSVVRGSLGKPRRLSEHFLRDERQKLAEYRESVRKHYAELRTGIRDGLPTDLARPLCVGQRVIAVHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPFNPLDNMPEALRRHIDDRKGSFMPIEPHINGNSNFGGCENHSSPLKVHTSSSALVMHGKAMVATVDNFCAQAGCVQPCKVTHHQAREADIHALSELKRALDKKETLLMELRSSNSDILENQNGIECLNDSEVFKKHYATVLVELKEASGQVSDAMLQLRQRNTYRGNSLPPWMKPQAGFSVHDDLPNMLDGSLTQEIGSTVVQIIKGSRSRAHAMVDAAFKALSLTKEGEDAFVKIGQALDSINHQQLASKSRLPVIRSQEQVNANGSFYHVNNSTCSVSESILNDPSGAKLHNYSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVSSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02094 1142 CDD SANT 52 82 IPR001005 -
Viun7g02094 1142 SMART DIRP_2 630 731 IPR033471 -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 573 600 - -
Viun7g02094 1142 Pfam DIRP 629 730 IPR033471 -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 9 30 - -
Viun7g02094 1142 Gene3D - 6 104 - -
Viun7g02094 1142 Pfam Myb-like DNA-binding domain 50 86 IPR001005 -
Viun7g02094 1142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 82 IPR017930 -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 413 474 - -
Viun7g02094 1142 ProSiteProfiles Myb-like domain profile. 50 91 IPR001005 -
Viun7g02094 1142 SMART sant 48 96 IPR001005 -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 31 48 - -
Viun7g02094 1142 Coils Coil 682 702 - -
Viun7g02094 1142 FunFam Protein ALWAYS EARLY 3 isoform A 8 104 - -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 233 262 - -
Viun7g02094 1142 PANTHER LIN-9 6 1142 IPR010561 GO:0006351|GO:0017053
Viun7g02094 1142 ProSiteProfiles SANT domain profile. 47 84 IPR017884 -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 1 48 - -
Viun7g02094 1142 Coils Coil 862 882 - -
Viun7g02094 1142 MobiDBLite consensus disorder prediction 448 473 - -
Viun7g02094 1142 SUPERFAMILY Homeodomain-like 46 95 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02094 Viun-Chr7 25740814 25754522 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g02094 DIRP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02094 - - gmx:100816217 1841.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02094 7 25740814 25754522 Viun7g02094 7 25740814 25754522 ECH
Viun6g01497 6 23191037 23196454 Viun7g02094 7 25740814 25754522 PCT