Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02088 ATGGATCAGGAGGAGCAAGATAAAGCTTTGCCCATTGCAAATGTGGGTAGAATCATGAAGCAAAACCTTCCTCCAAGTGCAAAGATCTCCAAGGAAGGGAAGCAACTAATGCAAGAGTGTGTTACAGAGTTCATAAGTTTTGTGACTGCTGAAGCATCTGACAAGTGTCACAAGGAGAATCGCAAAACCGTTAATGGGGATGACATCTGTTGGGCTCTAAGTTCCTTAGGGTTTGACAACTATGCTGAGGCCATAGCAATGTACTTGCATAAATACAGACAAGCAGAAAGGGAGAAAATCATTCACAACAACAAAAAATATGAAGGATCAGCAGCAAAATCTCTCAACCAAACTCAACTCATCCTTGCTCCTCCTCCTCCACCACCACCATCACTCTCTAGGGTTACTCATCACAAGGTTCAAAACCCTCCCACCACAGATCAATCCTAG 450 0.4356 MDQEEQDKALPIANVGRIMKQNLPPSAKISKEGKQLMQECVTEFISFVTAEASDKCHKENRKTVNGDDICWALSSLGFDNYAEAIAMYLHKYRQAEREKIIHNNKKYEGSAAKSLNQTQLILAPPPPPPPSLSRVTHHKVQNPPTTDQS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02088 149 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 10 73 IPR003958 -
Viun7g02088 149 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 105 IPR027113 GO:0001228|GO:0006355|GO:0016602
Viun7g02088 149 PRINTS CCAAT-binding transcription factor subunit A signature 37 55 - -
Viun7g02088 149 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Viun7g02088 149 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Viun7g02088 149 SUPERFAMILY Histone-fold 6 106 IPR009072 GO:0046982
Viun7g02088 149 Gene3D Histone, subunit A 1 122 IPR009072 GO:0046982
Viun7g02088 149 MobiDBLite consensus disorder prediction 135 149 - -
Viun7g02088 149 MobiDBLite consensus disorder prediction 113 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02088 Viun-Chr7 25697039 25697824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02088 5 116 CCAAT-HAP3 Transcription Factor Family AT1G09030 66.071 1.06e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Viun7g02088 CBFD_NFYB_HMF 5.6e-25 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02088 7 25697039 25697824 Viun7g02088 7 25697039 25697824 ECH