Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02083 ATGGATCACGCGCGATCGACCAACGGCGAGGACAATGCGGCGGGAATTCCGGACGACTTGCGGTGCAAGAGGTCTGACGGAAAGCAGTGGCGGTGCACGGCCATGTCGATGCCGGATAAGACGGTGTGCGAGAAACACTACATCCAGGCTAAGAAGCGCGCCGCGAATTCCGCAATGAGGGCCAACCTCAAGAAAGCCAAGAGGAAGTCGCAGTCGCTGAACGAGTCTGATGTTTATTTGGAGAGTAAGAGCGACGATTTCGACGTTCCTCTCTCCGCTATAAGCCTTTCGCAGAAGAAGCTCTCGAAGAACCAGTTTCGTTACACGCCCGAGCGTGACGGGCGAAGAGGCTCCTATGCGAGACACGCCCATGACGAGGTGGACATGGATGCGGATGCGGATGCGGATGTGGATGTGGATGTGGATGCGGATGCGGATGCGGATGCGGATGCGGATGTGGATGCGGATGTGGATGCGGATGCGGATGTGGATGTGGATGGGGATATGGACGCGGATGCAGATGCTGATGCTGATGTGGCGCTCTATGAAGAAGACAATTGGGTCTCTTATGATTCCCCACCGGACTCCTCGCGCAAGAGATCGCGAAGGAGCTTGGATGCTAATGCCACTACTCAGGAATATTCCGATGGAACCTCTGGTTCTTCTGAAGACACCGGCGGGCAGACTTGTCATCAGTGCCGGAGGAATGACCGAGATAGAGTTACTTGGTGCTTAAAATGTGACCGGAGGGGATACTGTGATAGCTGTATATCAGCATGGTACTCGGACATTTCGTTGGATGATATACAGAGGATATGTCCTGCTTGCCGCGGTATATGTAACTGCAAGACTTGCTTGCGGAGTGATAATTCTATCAAGGTTCGGATACGCGAGATACCTGTTCTGGATAAGTTACAGTACCTCCATGTGTTGCTATCTTCGGTTCTTCCGGTGGTAAAGCAGATCCACCGTGAACAGTGTTTTGAAGTTGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCCGAGAATAAAATTCAACACGGATGAACAGATGTGTTGCAATTTCTGTAGGATACCTATTACTGATTATCATCGACGTTGTCCAAATTGCTCATATGATTTGTGCCTTAATTGCTGTCGAGATCTTCGAGAAGCAACTGCAGATCACAATAAAGAACCTCAGACAGAGTTAGCTAAAACTTGTGATCAAAATATTTTAAGTAAATTTCCTCATTGGACATCCAATGACAATGGAAGTATTCCATGTCCTCCTAAGGAGTATGGTGGCTGCGGTCATTCTTCATTAAACTTAAGCCGAATTTTCAAGATGAATTGGGTAGCAAAGTTGGTGAAAAATGTAGAGGAAATGGTTAGTGGCTGCAGAATTAGTGATGCCGATGGTCCACCGGAAACTGGCCTGAATGGTCTCAGACTGTGCCAATGTTCTCATAGAGAAGCCAGTGATGATAATTATCTTTATTGTCCAGCATCTGACGATATAAAAAATGATGGGATTGGAAAATTTAGAAAGCACTGGAAAACTGGTGAGCCCATTATTGTTAAGAAAGTATTTGATGGGTCATCCATTTCAAGCTGGGATCCAATGGTCATATGGAGGGGGGTTCAAGAGACAACAGATGAAAAAGCAAAAGATGAAAACAGGATGGTTAAGGCCATAGATTGCTTAGATGGATCTGAGATTGATATCGAGCTTGCTCAGTTCATGAAAGGATACTTCGAAGGGCGTGTTCATGAAAATGGTTGGCCACAGTTATTAAAATTGAAGGATTGGCCTTCACCTAGCGCATCTGAAGAATTTCTATTGTATCAAAGACCCGAGTTTATCAGCAAACTACCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTCAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGACGTAGGACCCAAGATATATATAGCTTATGGAATTAGCAATGAACTTGGAAGAGGTGATTCAGTGACAAATCTCCACTTCAATATTCGTGACATGGTATACCTTTTGGTTCATACAAATGAAGTAAAGTTAAAGGACTGGCAGAGAACTAAAATTGAAATTATACAAAAGGCTAAAGCTGATGAGGAATCTGAAGCGAAAGAGTCACATGGAGATCCTCAAATATTTTCAAGGGGGAGTTCACTTGATTCATCACTTGGCACAAAAAGTAGTGGACTTGACATGGATTCAAACCAGAATAAGTCAATTATGGATCAAGAATTTGAAATTTATTCTAGTGCTGAAGGTAATATGGTCAATTGTAAGCTCCCGTCTACACAAAATGGAGATGTCTCTGAGAAAACACATCCTGGAGTTCTTTGGGATGTTTTTCGTCGGCAGGATGTACCAATATTGACTAAATATTTGAAAATACATTGGAAGGAATTGGGGAAGTCAGATGATGTGGGAAATGAATTTGTTGCATGGCCTCTTTATGGTGGAACTATTTTTCTCGACAAACACCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAGCCTTGGTCATTTGAACAGAATTTGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTCCAAGCAAGGAATGTTCAATCGAATGTTCAGCTGGGCCTTGATTTCTTATCTCCGGAAAGCCTGGGCGATGCTGTACGATTGACAGAGGAAATTCGATGTCTACCGAATGAACATGAATCAAAAGTTCAAGTATTGGAGGTGGGGAAGATATCTCTCTATGCAGCAAGTTCTGCCATCAAAGAAGTTCAGAAACTTGTACTTGACCAAAAACTTGGTGCCGAGATTGGATATGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAATTATGAGAAGATGGTTAAGCGGAGGCAGATTACTTGTGCTTGA 2910 0.4409 MDHARSTNGEDNAAGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSQSLNESDVYLESKSDDFDVPLSAISLSQKKLSKNQFRYTPERDGRRGSYARHAHDEVDMDADADADVDVDVDADADADADADVDADVDADADVDVDGDMDADADADADVALYEEDNWVSYDSPPDSSRKRSRRSLDANATTQEYSDGTSGSSEDTGGQTCHQCRRNDRDRVTWCLKCDRRGYCDSCISAWYSDISLDDIQRICPACRGICNCKTCLRSDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRIKFNTDEQMCCNFCRIPITDYHRRCPNCSYDLCLNCCRDLREATADHNKEPQTELAKTCDQNILSKFPHWTSNDNGSIPCPPKEYGGCGHSSLNLSRIFKMNWVAKLVKNVEEMVSGCRISDADGPPETGLNGLRLCQCSHREASDDNYLYCPASDDIKNDGIGKFRKHWKTGEPIIVKKVFDGSSISSWDPMVIWRGVQETTDEKAKDENRMVKAIDCLDGSEIDIELAQFMKGYFEGRVHENGWPQLLKLKDWPSPSASEEFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYIAYGISNELGRGDSVTNLHFNIRDMVYLLVHTNEVKLKDWQRTKIEIIQKAKADEESEAKESHGDPQIFSRGSSLDSSLGTKSSGLDMDSNQNKSIMDQEFEIYSSAEGNMVNCKLPSTQNGDVSEKTHPGVLWDVFRRQDVPILTKYLKIHWKELGKSDDVGNEFVAWPLYGGTIFLDKHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSNVQLGLDFLSPESLGDAVRLTEEIRCLPNEHESKVQVLEVGKISLYAASSAIKEVQKLVLDQKLGAEIGYGDPNLTAMVSENYEKMVKRRQITCA 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02083 969 MobiDBLite consensus disorder prediction 705 719 - -
Viun7g02083 969 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 225 290 IPR018866 -
Viun7g02083 969 ProSiteProfiles WRC domain profile. 16 60 IPR014977 -
Viun7g02083 969 MobiDBLite consensus disorder prediction 1 20 - -
Viun7g02083 969 MobiDBLite consensus disorder prediction 207 229 - -
Viun7g02083 969 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 934 IPR045109 GO:0032454|GO:0033169
Viun7g02083 969 ProSiteProfiles Zinc finger RING-type profile. 230 277 IPR001841 -
Viun7g02083 969 MobiDBLite consensus disorder prediction 54 75 - -
Viun7g02083 969 Gene3D Cupin 490 908 - -
Viun7g02083 969 MobiDBLite consensus disorder prediction 705 745 - -
Viun7g02083 969 Coils Coil 56 76 - -
Viun7g02083 969 ProSiteProfiles JmjC domain profile. 603 899 IPR003347 -
Viun7g02083 969 SMART cupin_9 610 899 IPR003347 -
Viun7g02083 969 MobiDBLite consensus disorder prediction 184 230 - -
Viun7g02083 969 MobiDBLite consensus disorder prediction 146 171 - -
Viun7g02083 969 Pfam JmjC domain, hydroxylase 831 878 IPR003347 -
Viun7g02083 969 Pfam WRC 17 57 IPR014977 -
Viun7g02083 969 MobiDBLite consensus disorder prediction 721 745 - -
Viun7g02083 969 SUPERFAMILY Clavaminate synthase-like 512 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02083 Viun-Chr7 25626019 25633096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02083 17 57 GRF Transcription Factor Family AT3G13960 46.341 2.24e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Viun7g02083 JmjC 1.4e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02083 K15601 - gmx:100801287 1659.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02083 7 25626019 25633096 Viun7g02083 7 25626019 25633096 ECH