Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02064 ATGAGTCGAGGAGGTGTAACTGCTGCGAAGGGCAAGAAGAAGGGGGTGACATTCACCATTGACTGTGCAAAGCCAGTGGAGGACAAGATCATGGACATTGCGTCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGCTGGCAAGGCCGGTGCTCTCGGTGACACAGTCGCCGTCGCACGCGAGAAGACCAAAATCATTGTTACTTCCGACAGCAACTTCTCTAAACGGTACCTCAAGTACTTGACTAAGAAGTATTTGAAGAAGCACAATGTGCGTGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAGCGTTTATGAACTGAGGTACTTCAATATCGCTGAGAATGAAGGAGAGGAAGAAGATTAG 375 0.472 MSRGGVTAAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVAGKAGALGDTVAVAREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02064 124 PANTHER 60S RIBOSOMAL PROTEIN L22 5 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Viun7g02064 124 Gene3D - 6 124 IPR038526 -
Viun7g02064 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Viun7g02064 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02064 Viun-Chr7 25473764 25474864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02064 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.871 1.08e-65 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02064 K02891 - gmx:100499952 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02064 7 25473764 25474864 Viun7g02064 7 25473764 25474864 ECH
Viun6g01470 6 22984399 22985786 Viun7g02064 7 25473764 25474864 ECH
Viun7g02064 7 25473764 25474864 Viun6g01470 6 22984399 22985786 ECH
Viun7g02064 7 25473764 25474864 Viun7g01726 7 22234371 22235787 ECH
Viun6g01470 6 22984399 22985786 Viun7g02064 7 25473764 25474864 PCT