Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02056 ATGAACGAGGAAGATGGAGCAAGCAAGAGGAATATCGCCCTTATTTGTATTACTACCATCTTCCTTGTGGCTTTGATCATAGGCATCGCATTTAGCGTCAACGTGGAGACGGACAGTTCCCACAGTGAAAGACCACAGAAGGATCGCGTTGTTTCGTCTGTGAAAGCGGTGAGAATCCTTTGTAAACCCACAATGTACCAGAAAGAATGTGAGAAAAGTCTGATAAAAGATGCGGGGAACATCACAGACTCCAGAGAACTCATTAAAATTGCATTCAATGTAACCATGAAGAGAATAGGTAAAGGACTAAAAAAAATAGATACCATGCGCAAGAATGAGAGTGACCCCAGAACCAAGATGGCGTTTGGAACATGCACGCAACTGCTCAATCTTTCCACTGGGGAATTCAATAGGGCAATCGAGAAAATGGGCAAGTTTGATCTCAACAATCTCAACAACATCCTCACTAGTTTGAAAGTTTGGCTCAGCGGTGCAATCACGTACCAAGAAACTTGCTTGGATGGTTTCAATAACGCCACCACCCATTCAGGGAGTAAGATGAGGAGCTTGTTGACCACTTCCATGCACCTCAGCAGCAACGCCCTTGCCATCATCTCAGCACTTGTTAGCACTGTCGAAATTACGGAAGCCGGGAGTCGCAACCTTTCTGAGGGTGGCGAACATGTTTTTGGTCACGGTGAGGTTGTTCCCTCGTGGGTTGTCGATGATGATGATGATGATGATGATGGTGTTCGTAGACTCCTTCTTCAAAATCCTCATAAACTGAAGGCTAACGCGGTTGTAGCCAAAGATGGTAGCGAAAAGTTCACGACCATCGGCCAGGCATTAAAGATGGTGCCTAAGAAGAACAAAAGGCCATTCGTGATTCACATTAGGGGGGGTGTTTATCATGAGTACGTTGAAGTCCCTAAATTCATGACTCGCGTCGTGTTTGTCGGTGATGGTCCCAACAGAACACGAATCACGGGCAAGAGAAACTTCGTGGATGGAACGGTTACTTACAGAACCGCCACAGTTGCTATTCATGGAGATTACTTTGTGGCCATCAATATAGGGTTTGAGAATTCCGCTGGTCCCCAGAAACATCAAGCAGTGGCCATAAGGGTTCAAGCAGACAGATCCATTTTCTACAAATGCTGGATAGATGGGTATGAGAACACGTTGTATGCTCTTGCAATGCGTCAGTTTTATCGGGAATGCAGGATTTCAGGCACCGTGGATTTTGTGTTTGGTGATGCAGTGGCTGTTTTTCAAAAGTGCATTTTCGTGGTGAAAAAGCCATTGAAAAACCAAGAATTGATTGTGACTTCTCAAGGTAGAAAGGAGAAGCAGCAACCGACAGGAATAGTGATACAAGGAAGCATCATTGTGGGAAATGGTAGAGTGAAGTTTGATAACAAGGCTTACCTTGCTCGTCCACAGAAGAGTTACTCGAGGACCATCTTCATGAACACTTACATGGAGGACATTATCGAACCAGAGGGGTATCTGGCACGGCAAGGACGACATGGTCCTTCAGGTATGAACACTTGTTTCTATAGTGAGTACAATAACAGTGGTCCTGGTTCAGACAAATCGAAGCGTGTAAAATGGCGTGGGATCAAGACACTGAATGCAAAATCTGCGACGGAATACTCACCACTCAATTTTTTTCATGGAGATCAATGGGTTAGAGTTACTAAGATTCCTTACTATCCTAATATCCTCCCCAAGCTCTAA 1740 0.4477 MNEEDGASKRNIALICITTIFLVALIIGIAFSVNVETDSSHSERPQKDRVVSSVKAVRILCKPTMYQKECEKSLIKDAGNITDSRELIKIAFNVTMKRIGKGLKKIDTMRKNESDPRTKMAFGTCTQLLNLSTGEFNRAIEKMGKFDLNNLNNILTSLKVWLSGAITYQETCLDGFNNATTHSGSKMRSLLTTSMHLSSNALAIISALVSTVEITEAGSRNLSEGGEHVFGHGEVVPSWVVDDDDDDDDGVRRLLLQNPHKLKANAVVAKDGSEKFTTIGQALKMVPKKNKRPFVIHIRGGVYHEYVEVPKFMTRVVFVGDGPNRTRITGKRNFVDGTVTYRTATVAIHGDYFVAINIGFENSAGPQKHQAVAIRVQADRSIFYKCWIDGYENTLYALAMRQFYRECRISGTVDFVFGDAVAVFQKCIFVVKKPLKNQELIVTSQGRKEKQQPTGIVIQGSIIVGNGRVKFDNKAYLARPQKSYSRTIFMNTYMEDIIEPEGYLARQGRHGPSGMNTCFYSEYNNSGPGSDKSKRVKWRGIKTLNAKSATEYSPLNFFHGDQWVRVTKIPYYPNILPKL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02056 579 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Viun7g02056 579 Gene3D - 262 576 IPR012334 -
Viun7g02056 579 FunFam Pectinesterase 4 262 575 - -
Viun7g02056 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Viun7g02056 579 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Viun7g02056 579 Pfam Pectinesterase 265 561 IPR000070 GO:0030599|GO:0042545
Viun7g02056 579 NCBIfam pectinesterase inhibitor domain 52 208 IPR006501 GO:0004857
Viun7g02056 579 PANTHER PECTINESTERASE 21 565 - -
Viun7g02056 579 FunFam Pectinesterase 53 209 - -
Viun7g02056 579 SUPERFAMILY Pectin lyase-like 263 573 IPR011050 -
Viun7g02056 579 CDD PMEI-like_3 60 210 - -
Viun7g02056 579 SMART PMEI_2 52 204 IPR006501 GO:0004857
Viun7g02056 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02056 Viun-Chr7 25419145 25421334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02056 3 576 Carbohydrate Esterase AT3G05610 44.254 6.94e-176 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02056 K01051 - gmx:100810853 747.658