Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02055 ATGAAGACCTGGACCACCTTGTACACCCTTGTTTTCCTCTTCATTATCTTCCTTTCTTCCTCTCATGTTGCTTTCTCTTTCTCAGATACCACATGCAACACTACACCCTACCCTGCATTCTGCAAAACCACTCTACCACCTCAATATTTATCCACACATGACCAATTCCGTTTCCTCCTTCACCAATCCTTATCAACAACAAAAACGATTGCTGCATTGGTCTCTTCTTATCTCACAAACCACTACGCCATTCATAGTTCAACACTGCACGCCCTTGAAGATTGCTTCAACCTTTCACAACTCAACATTGATTTCTTGTCCACTGTCCTCCAAGCCATTCAAAACAACGTCAATGGCTTTCAAGTCTACGACTTGCATACCTTGCTCAGTGCCATTTTAACCAACCAACAAACGTGCTTCAACGGTTTTAACGAGGTAACTCCCTGTCCTGTAGTTACCGGTGCCTTGTCAAGTCCCCTTTCCGATGCGATCAAACTATATAGCATATCTCTGGCCCTTTTCACCCGTGGTTGGGTTAGCGATGCCACGGAAGGATCAACCACAGTTGAGACTATTACTAATAGAAAGTTACTCCAAACAAGCGTTGACAATGTGGAGGTGAGGCAAAAGGTGGTGGTGAACCCTGATGGGTCTGGTGATTTCACCACCATAAATGATGCAGTGGCGGCTGCACCTGAAAACAGCGGCACCAACAACGGGTACCATGTAATCTATGTTGTCGCGGGGATTTACAACGAGTACGTGTTTATTCCTAAGAGCAAGCAGAACCTGATGTTGGTTGGAGATGGCATCAACCGCACTGTGCTCACTGGCGATCGCAGCGTTGTCGATGGCTGGACCACTTTCCAATCTGCAACTTTTGCTGTTGTTGGAAAAGGGTTTGTTGCCATGAACATAACATTTCGTAACACTGCTGGGTCCAGCAAGCATCAAGCTGTGGCTGTTAGAAACGGGGCAGACATGTCCACGTTCTATTATTGCAGTTTCGAGGGTTACCAGGACACACTGTACGTACATTCCCTAAGGCAATTCTACAAACGCTGTGACATTTATGGCACTGTGGATTTTATATTCGGCAATGCAGCAACGGTATTCCAGGATTGTAACATGTATCCGAGACTTCCTATGTTAAACCAGTTCAATGCAATCACAGCACAAGGGCGAACAGATCCAAACCAAAACACTGGCATCTCCATACAGAACTGCTGCATAATAGGAGCCAGTGAATTGGGTGATGCTACTAGCAACTATAATGGGATACAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCTAGAACTGTTTACATAGAATCTTTCATGGATGGCCTAATTGATCCAAAGGGGTGGACAGAATGGTCAGGGGATTTTGCTTTGAGCACACTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACACCAGCAATAGGGTCACTTGGGAAGGGTACCATCTCATGGATCAAAAGGATGCACTTGACTTCACGGTGCAGAAGTTTATTCAAGGTGACAAATGGCTACCCTCCACAGGAGTACCTTTCAAAGCTGGGTTACAGTAA 1584 0.4539 MKTWTTLYTLVFLFIIFLSSSHVAFSFSDTTCNTTPYPAFCKTTLPPQYLSTHDQFRFLLHQSLSTTKTIAALVSSYLTNHYAIHSSTLHALEDCFNLSQLNIDFLSTVLQAIQNNVNGFQVYDLHTLLSAILTNQQTCFNGFNEVTPCPVVTGALSSPLSDAIKLYSISLALFTRGWVSDATEGSTTVETITNRKLLQTSVDNVEVRQKVVVNPDGSGDFTTINDAVAAAPENSGTNNGYHVIYVVAGIYNEYVFIPKSKQNLMLVGDGINRTVLTGDRSVVDGWTTFQSATFAVVGKGFVAMNITFRNTAGSSKHQAVAVRNGADMSTFYYCSFEGYQDTLYVHSLRQFYKRCDIYGTVDFIFGNAATVFQDCNMYPRLPMLNQFNAITAQGRTDPNQNTGISIQNCCIIGASELGDATSNYNGIQTYLGRPWKEYSRTVYIESFMDGLIDPKGWTEWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLMDQKDALDFTVQKFIQGDKWLPSTGVPFKAGLQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02055 527 CDD PMEI-like_3 30 178 - -
Viun7g02055 527 FunFam Pectinesterase 204 526 - -
Viun7g02055 527 PANTHER PECTINESTERASE 17 516 - -
Viun7g02055 527 Pfam Pectinesterase 211 512 IPR000070 GO:0030599|GO:0042545
Viun7g02055 527 ProSitePatterns Pectinesterase signature 2. 357 366 IPR033131 -
Viun7g02055 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 176 IPR035513 -
Viun7g02055 527 Gene3D - 204 526 IPR012334 -
Viun7g02055 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 176 IPR035513 -
Viun7g02055 527 NCBIfam pectinesterase inhibitor domain 8 174 IPR006501 GO:0004857
Viun7g02055 527 Pfam Plant invertase/pectin methylesterase inhibitor 27 173 IPR006501 GO:0004857
Viun7g02055 527 SMART PMEI_2 23 173 IPR006501 GO:0004857
Viun7g02055 527 SUPERFAMILY Pectin lyase-like 211 525 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02055 Viun-Chr7 25416507 25418457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02055 10 526 Carbohydrate Esterase AT4G02330 49.559 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02055 K01051 - gmx:100810329 875.93