Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02046 ATGGGGCATTTTTCATCTGCGTTCACTAGGTTGGCGAAGTCCTTTGCAACGAAGAGAAGTGGGAGTTCTGATGGATGCAACGGGAGAGAAGCTGCGGAAGCAATGGCGAAGGAAGCCAAAAAAAATCACTTCATGTTGCACAGCTCCGGAACCGTTAATGTTGACGGTTCAAACAACTTTGCCTCACTTTTCTCCAAAAAAGGAAAGAAAGGAGTGAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATTTTCTGTGGGATTTTTGACGGGCACGGGCCATGGGGTCACTTTGTGGCCAAGAGAGTGAGAGAGTCAATGCCACCATCTCTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCAAGATGTTGATGTTGATATTGCAGCAGAGAAAAAGCAACACCGGTTCAATATATGGAAGCACTCTTACTTGAAAACTTGTGCTGCCATTGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGCACAACTGCTTTGTCCATTGTTAGACAGGGTGAACTAATTGTAATTGCAAACGTTGGTGATTCTCGTGCTGTGTTAGGCACAGCATCGGATGATGGAAGTTTGGTAGCAGTTCAATTGACAGTAGATTTCAAACCCAGTTTACCGCAGGAAGCGGAGAGAATAGTGGAGTGCCAAGGACGAGTTTTCTGCTTGGAAGACGAGCCTGGGGTGTACAGGGTGTGGTTACCTGACGAGGAATCACCAGGACTTGCAATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAGAGTATGGTCTTATTTCAGTGCCTGAAGTAACACACAGGAACATAACCAGCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCGAATCAAGAAGCAGTGGATATTGTGTGTTCAACAGCAGACAGAACAGAGTCTGCGAAACATCTGGTGGAGTGTGCGATGCGTGCATGGAAACGTAAGAGGAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCATCACTTCACCGTGTTGATGCCACCCTAGAATAG 1107 0.4616 MGHFSSAFTRLAKSFATKRSGSSDGCNGREAAEAMAKEAKKNHFMLHSSGTVNVDGSNNFASLFSKKGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLSQTSLDQDVDVDIAAEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLGTASDDGSLVAVQLTVDFKPSLPQEAERIVECQGRVFCLEDEPGVYRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTHRNITSKDQFVVLATDGVWDVISNQEAVDIVCSTADRTESAKHLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLHRVDATLE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02046 368 SMART PP2C_4 51 352 IPR001932 -
Viun7g02046 368 Gene3D - 51 356 IPR036457 -
Viun7g02046 368 CDD PP2Cc 59 354 IPR001932 -
Viun7g02046 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Viun7g02046 368 PANTHER PROTEIN PHOSPHATASE 41 352 IPR015655 GO:0004722|GO:0006470
Viun7g02046 368 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Viun7g02046 368 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Viun7g02046 368 FunFam Probable protein phosphatase 2C 34 51 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02046 Viun-Chr7 25336506 25339473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02046 1 355 PP2C-type Phosphatase Gene Family AT3G05640 69.188 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02046 - - gmx:100793051 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02046 7 25336506 25339473 Viun7g02046 7 25336506 25339473 ECH
Viun1g03007 1 38615112 38618116 Viun7g02046 7 25336506 25339473 PCT
Viun6g01381 6 22510125 22513331 Viun7g02046 7 25336506 25339473 PCT