Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02030 ATGCTTCCTCCAACGCACGGAAGTTTCCAAGACCGTGAAGACCTTATTAAACATGTTCGTGACTTTGGTGCTAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGGGGTGTCTATCGTAATAGGCGGAAAATTGATGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGGCTTATAAACTGTCCTTTTGAAGCCATTGGTAAAAAGGAGGAAGAAGCATGGGTACTTACCATAAAAAATGGAGATCACAACCATGAACCATTGAAAGACATTTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATCAAACAAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCAAAGTAATCCAGATATGCAATCAACACCAAGACATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAAAAAACTTTTAAGTCATGGAGACCAAATAGATCTATCCTGGTCGACACAAACAATTCTCCATCTGGTGGTTCATTAAACCAAAACTTCCAGCTGCTGAAGGTCCCAAATTTTATTGGGGGGAACTTTGTAGATTCTCTGGGTTCTGTAATCATTGATGTTATAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCATTTAACTACATATGAAGAATTTAAAGCTGCAGTTAGTGCAGCCAAGCAGGCTTTTCCTTCATGGAAAAACACTCCTATCACTACTCGTATACGTATTATGTTTAAGCTTCAGGAGCTTATCCGCAGAGATATTGATAAGCTTGCCATGAACATCACCATAGAACAGGGCAAGCCATCAAAAGGTGCCGAAAGAGATGTGCTTCATGGTATAGAAGTGGTGGAGCATGCTTGTGGGATGGTAAACCTGCAAATGGGGGAATTTGTCCCCAATGCCTATAATGGGATTGATACATACTGCATCCGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTGAACTTTTCAGCAACTATGCCATTGTGGATGTTCCCTATTGCAGTTACATGTGGCAACACTTACATTCTCAATTCATGTGAGAAAAATCCAGGCGTTTCAATGATACTTGCAGCACTAGCAAAGGAAGCTGGTTTGCCAGATGGTGTATTAAATATTATTCATGGTACCAATGATATCGTTAATTACGTATGTGATGATGAAGACATAAAAGCTGTATTGTTTCTTGGTCCAATTACAGCTGGAATATATGCCACGGCTGTTGGTAGAGGGAAACGTGTTCAGGCAAATGCTGGCTGCACAAATCATATACTTGTGATGCCCGATGCTAGTTTGGATGCTACTTTAGATGCCCTTGTTCCTGCTTGTTTCGATGCCACAGGAGAAAGGTGCATAGCTATTTTTGTTGGAGGTTCAATGCAGTGGGAAGAAAAACTAGTGCAGCGTGCCAAACTACTTAAAGTGAATGCAGGAACAGATCCTTGTGCTGATATTGGTCCAGTTATCAGCAAAGAGGCCAAGGAGAGGATAAGTGGACTAGTTCAGAGGAGTGTTGAAAATGGGGCTAGACTTGTACTTGATGGAAGAGATATTGTGATACCGGGATATGAGAGTGGGAACTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCAGCATAGAATGTTACAGGGAAGAAATTTTTGGACCAGTGCTACTTTGCATGCAGGCTGATAACATTGATGAGGCTATAGCAGTAATAAATAAAAACAGATATGGAAATGGAGCTTCTATATTCACCACATCCAGTATAGCTGCTAGGAGGTTCCAGACTGAGGTTGAGGCTGGATTGGTTGGGATCAACGTGCCTGTTCCATTACCATTTTCCTCCAATGGTTCAAAAGCATCTCTTGCTGGTGATAGCTTTTGGGGAAAAGCAGGCATACAGTTTTATACCCAAATCAAAACAGTGGCACACCGATGGAATGATTACCCTGGAATTGGAGTATTCCCGACCACATCTCCATCTAAGAGAGATTTTCCTAGGCAATTATCACAAGCCATGCCAATGGAATCTGAAAGTGATTCACCAACCTATGAAGTACAAGTAACCATCACTGATGCAGATATACCAAACACAACCATGTCGTCCGCATCTACATCAACTGAGAAGGATCACACAAGCCAGGATGTTTCCCTAGTGCTGCCTTCAACTTCTAAGAGGGACATGTCACTAGCATTATCATCTGCATTGCAAAGGGATTTACCTAGCCAAGGAGTGTCTGTTGCAACACCACAGGCATCAGAGAGGATGTATGTTTCTGAAACATCTCAGTGGAATGAAATTTCCCCAGAAACATCACAAAGGAGTGAAATTGTTCCACCAACTTGTGAGAGGAGTCATGTTTCTGTATCGCAGATGAATGGAAACTTATTTACCCCCAATAGGACTGATTCTGTTGCAGCTTTGAAACCAGAGGGGATATACTTGTCCACGTTTGGAAGTACTGACCCCATGTTTCCAACTTCTGAGAAATTATACACGCCTTCAATACTTTAG 2571 0.4177 MLPPTHGSFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKATSRLINCPFEAIGKKEEEAWVLTIKNGDHNHEPLKDISEHPYSRRFTEEEVRQIKQMTEAGIKPRQVLKALKQSNPDMQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSILVDTNNSPSGGSLNQNFQLLKVPNFIGGNFVDSLGSVIIDVINPATQEVVSQVHLTTYEEFKAAVSAAKQAFPSWKNTPITTRIRIMFKLQELIRRDIDKLAMNITIEQGKPSKGAERDVLHGIEVVEHACGMVNLQMGEFVPNAYNGIDTYCIREPLGVCAGICPLNFSATMPLWMFPIAVTCGNTYILNSCEKNPGVSMILAALAKEAGLPDGVLNIIHGTNDIVNYVCDDEDIKAVLFLGPITAGIYATAVGRGKRVQANAGCTNHILVMPDASLDATLDALVPACFDATGERCIAIFVGGSMQWEEKLVQRAKLLKVNAGTDPCADIGPVISKEAKERISGLVQRSVENGARLVLDGRDIVIPGYESGNFVGPTILCDVTTSIECYREEIFGPVLLCMQADNIDEAIAVINKNRYGNGASIFTTSSIAARRFQTEVEAGLVGINVPVPLPFSSNGSKASLAGDSFWGKAGIQFYTQIKTVAHRWNDYPGIGVFPTTSPSKRDFPRQLSQAMPMESESDSPTYEVQVTITDADIPNTTMSSASTSTEKDHTSQDVSLVLPSTSKRDMSLALSSALQRDLPSQGVSVATPQASERMYVSETSQWNEISPETSQRSEIVPPTCERSHVSVSQMNGNLFTPNRTDSVAALKPEGIYLSTFGSTDPMFPTSEKLYTPSIL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02030 856 MobiDBLite consensus disorder prediction 715 735 - -
Viun7g02030 856 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 442 636 - -
Viun7g02030 856 Pfam Aldehyde dehydrogenase family 214 661 IPR015590 GO:0016491
Viun7g02030 856 SUPERFAMILY ALDH-like 193 667 IPR016161 GO:0016491
Viun7g02030 856 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 38 671 IPR010061 GO:0004491
Viun7g02030 856 CDD ALDH_F6_MMSDH 199 665 IPR010061 GO:0004491
Viun7g02030 856 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 442 635 IPR016163 GO:0016620
Viun7g02030 856 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 203 448 - -
Viun7g02030 856 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 200 665 IPR010061 GO:0004491
Viun7g02030 856 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 218 642 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02030 Viun-Chr7 25182376 25212110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02030 198 649 Aldehyde Dehydrogenase Gene Family AT2G14170 67.316 0.0 642