Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02029 ATGGAGACTCTTAATCAATCAGAGCCTATAGGACTAAGAAGGATGCTTCCTCCAACGCACGGAAGTTTCCAAGACCGTGAAGACCTTATTAAACATGTTCGTGACTTTGGTGCTAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGGGGTGTCTATCGTAATAGGCGGAAAATTGATGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGGCTTATAAACTGTCCTTTTGAAGCCATTGGTAAAAAGGAGGAAGAAGCATGGGTACTTACCATAAAAAATGGAGATCACAACCATGAACCATTGAAAGACATTTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATCAAACAAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCAAAGTAATCCAGATATGCAATCAACACCAAGACATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAAAAAACTTTTAAGTCATGGAGACCAAATAGATCTATCCTGGTCGACACAAACAATTCTCCATCTGGTGGTTCATTAAACCAAAACTTCCAGCTGCTGAAGGTCCCAAATTTTATTGGGGGGAACTTTGTAGATTCTCTGGGTTCTGTAATCATTGATGTTATAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCATTTAACTACATATGAAGAATTTAAAGCTGCAGTTAGTGCAGCCAAGCAGGCTTTTCCTTCATGGAAAAACACTCCTATCACTACTCGTATACGTATTATGTTTAAGCTTCAGGAGCTTATCCGCAGAGATATTGATAAGCTTGCCATGAACATCACCATAGAACAGGGCAAGCCATCAAAAGGTGCCGAAAGAGATGTGCTTCATGGTATAGAAGTGGTGGAGCATGCTTGTGGGATGGTAAACCTGCAAATGGGGGAATTTGTCCCCAATGCCTATAATGGGATTGATACATACTGCATCCGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTGAACTTTTCAGCAACTATGCCATTGTGGATGTTCCCTATTGCAGTTACATGTGGCAACACTTACATTCTCAATTCATGTGAGAAAAATCCAGGCGTTTCAATGATACTTGCAGCACTAGCAAAGGAAGCTGGTTTGCCAGATGGTGTATTAAATATTATTCATGGTACCAATGATATCGTTAATTACGTATGTGATGATGAAGACATAAAAGCTGTATTGTTTCTTGGTCCAATTACAGCAAATGCTGGCTGCACAAATCATATACTTGTGATGCCCGATGCTAGTTTGGATGCTACTTTAGATGCCCTTGTTCCTGCTTGTTTCGATGCCACAGGAGAAAGGTGCATAGCTATTTTTGTTGGAGGTTCAATGCAGTGGGAAGAAAAACTAGTGCAGCGTGCCAAACTACTTAAAGTGAATGCAGGAACAGATCCTTGTGCTGATATTGGTCCAGTTATCAGCAAAGAGGCCAAGGAGAGGATAAGTGGACTAGTTCAGAGGAGTGTTGAAAATGGGGCTAGACTTGTACTTGATGGAAGAGATATTGTGATACCGGGATATGAGAGTGGGAACTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCAGCATAGAATGTTACAGGGAAGAAATTTTTGGACCAGTGCTACTTTGCATGCAGGCTGATAACATTGATGAGGCTATAGCAGTAATAAATAAAAACAGATATGGAAATGGAGCTTCTATATTCACCACATCCAGTATAGCTGCTAGGAGGTTCCAGACTGAGGTTGAGGCTGGATTGGTTGGGATCAACGTGCCTGTTCCATTACCATTTTCCTCCAATGGTTCAAAAGCATCTCTTGCTGGTGATAGCTTTTGGGGAAAAGCAGGCATACAGTTTTATACCCAAATCAAAACAGTGGCACACCGATGGAATGATTACCCTGGAATTGGAGTATTCCCGACCACATCTCCATCTAAGAGAGATTTTCCTAGGCAATTATCACAAGCCATGCCAATGGAATCTGAAAGTGATTCACCAACCTATGAAGTACAAGTAACCATCACTGATGCAGATATACCAAACACAACCATGTCGTCCGCATCTACATCAACTGAGAAGGATCACACAAGCCAGGATGTTTCCCTAGTGCTGCCTTCAACTTCTAAGAGGGACATGTCACTAGCATTATCATCTGCATTGCAAAGGGATTTACCTAGCCAAGGAGTGTCTGTTGCAACACCACAGGCATCAGAGAGGATGTATGTTTCTGAAACATCTCAGTGGAATGAAATTTCCCCAGAAACATCACAAAGGAGTGAAATTGTTCCACCAACTTGTGAGAGGAGTCATGTTTCTGTATCGCAGATGAATGGAAACTTATTTACCCCCAATAGGACTGATTCTGTTGCAGCTTTGAAACCAGAGGGGATATACTTGTCCACGTTTGGAAGTACTGACCCCATGTTTCCAACTTCTGAGAAATTATACACGCCTTCAATACTTTAG 2568 0.4159 METLNQSEPIGLRRMLPPTHGSFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKATSRLINCPFEAIGKKEEEAWVLTIKNGDHNHEPLKDISEHPYSRRFTEEEVRQIKQMTEAGIKPRQVLKALKQSNPDMQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSILVDTNNSPSGGSLNQNFQLLKVPNFIGGNFVDSLGSVIIDVINPATQEVVSQVHLTTYEEFKAAVSAAKQAFPSWKNTPITTRIRIMFKLQELIRRDIDKLAMNITIEQGKPSKGAERDVLHGIEVVEHACGMVNLQMGEFVPNAYNGIDTYCIREPLGVCAGICPLNFSATMPLWMFPIAVTCGNTYILNSCEKNPGVSMILAALAKEAGLPDGVLNIIHGTNDIVNYVCDDEDIKAVLFLGPITANAGCTNHILVMPDASLDATLDALVPACFDATGERCIAIFVGGSMQWEEKLVQRAKLLKVNAGTDPCADIGPVISKEAKERISGLVQRSVENGARLVLDGRDIVIPGYESGNFVGPTILCDVTTSIECYREEIFGPVLLCMQADNIDEAIAVINKNRYGNGASIFTTSSIAARRFQTEVEAGLVGINVPVPLPFSSNGSKASLAGDSFWGKAGIQFYTQIKTVAHRWNDYPGIGVFPTTSPSKRDFPRQLSQAMPMESESDSPTYEVQVTITDADIPNTTMSSASTSTEKDHTSQDVSLVLPSTSKRDMSLALSSALQRDLPSQGVSVATPQASERMYVSETSQWNEISPETSQRSEIVPPTCERSHVSVSQMNGNLFTPNRTDSVAALKPEGIYLSTFGSTDPMFPTSEKLYTPSIL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02029 855 CDD ALDH_F6_MMSDH 213 664 IPR010061 GO:0004491
Viun7g02029 855 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 448 667 IPR016163 GO:0016620
Viun7g02029 855 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 208 447 IPR016162 GO:0016491
Viun7g02029 855 Pfam Aldehyde dehydrogenase family 228 660 IPR015590 GO:0016491
Viun7g02029 855 SUPERFAMILY ALDH-like 207 666 IPR016161 GO:0016491
Viun7g02029 855 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 52 670 IPR010061 GO:0004491
Viun7g02029 855 MobiDBLite consensus disorder prediction 714 734 - -
Viun7g02029 855 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 441 635 - -
Viun7g02029 855 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 214 664 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02029 Viun-Chr7 25182376 25212110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02029 212 648 Aldehyde Dehydrogenase Gene Family AT2G14170 65.368 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02029 K00140 - gmx:100796803 1417.91