Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02025 ATGGAGACTCTTAATCAATCAGAGCCTATAGGACTAAGAAGGATGCTTCCTCCAACGCACGGAAGTTTCCAAGACCGTGAAGACCTTATTAAACATGTTCGTGACTTTGGTGCTAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGGGGTGTCTATCGTAATAGGCGGAAAATTGATGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGGCTTATAAACTGTCCTTTTGAAGCCATTGGTAAAAAGGAGGAAGAAGCATGGGTACTTACCATAAAAAATGGAGATCACAACCATGAACCATTGAAAGACATTTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATCAAACAAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCAAAGTAATCCAGATATGCAATCAACACCAAGACATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAAAAAACTTTTAAGTCATGGAGACCAAATAGATCTATCCTGGTCGACACAAACAATTCTCCATCTGGTGGTTCATTAAACCAAAACTTCCAGCTGCTGAAGGTCCCAAATTTTATTGGGGGGAACTTTGTAGATTCTCTGGGTTCTGTAATCATTGATGTTATAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCATTTAACTACATATGAAGAATTTAAAGCTGCAGTTAGTGCAGCCAAGCAGGCTTTTCCTTCATGGAAAAACACTCCTATCACTACTCGTATACGTATTATGTTTAAGCTTCAGGAGCTTATCCGCAGAGATATTGATAAGCTTGCCATGAACATCACCATAGAACAGGGCAAGCCATCAAAAGGTGCCGAAAGAGATGTGCTTCATGGTATAGAAGTGGTGGAGCATGCTTGTGGGATGGTAAACCTGCAAATGGGGGAATTTGTCCCCAATGCCTATAATGGGATTGATACATACTGCATCCGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTGAACTTTTCAGCAACTATGCCATTGTGGATGTTCCCTATTGCAGTTACATGTGGCAACACTTACATTCTCAATTCATGTGAGAAAAATCCAGGCGTTTCAATGATACTTGCAGCACTAGCAAAGGAAGCTGGTTTGCCAGATGGTGTATTAAATATTATTCATGGTACCAATGATATCGTTAATTACGTATGTGATGATGAAGACATAAAAGCTGTATTGTTTCTTGGTCCAATTACAGCTGGAATATATGCCACGGCTGTTGGTAGAGGGAAACGTGTTCAGGCAAATGCTGGCTGCACAAATCATATACTTGTGATGCCCGATGCTAGTTTGGATGCTACTTTAGATGCCCTTGTTCCTGCTTGTTTCGATGCCACAGGAGAAAGGTGCATAGCTATTTTTGTTGGAGGTTCAATGCAGTGGGAAGAAAAACTAGTGCAGCGTGCCAAACTACTTAAAGTGAATGCAGGAACAGATCCTTGTGCTGATATTGGTCCAGTTATCAGCAAAGAGGCCAAGGAGAGGATAAGTGGACTAGTTCAGAGGAGTGTTGAAAATGGGGCTAGACTTGTACTTGATGGAAGAGATATTGTGATACCGGGATATGAGAGTGGGAACTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCAGCATAGAATGTTACAGGGAAGAAATTTTTGGACCAGTGCTACTTTGCATGCAGGCTGATAACATTGATGAGGCTATAGCAGTAATAAATAAAAACAGATATGGAAATGGAGCTTCTATATTCACCACATCCAGTATAGCTGCTAGGAGGTTCCAGACTGAGGTTGAGGCTGGATTGGTTGGGATCAACGTGCCTGTTCCATTACCATTTTCCTCCAATGGTTCAAAAGCATCTCTTGCTGGAAAAGCAGGCATACAGTTTTATACCCAAATCAAAACAGTGGCACACCGATGGAATGATTACCCTGGAATTGGAGTATTCCCGACCACATCTCCATCTAAGAGAGATTTTCCTAGGCAATTATCACAAGCCATGCCAATGGAATCTGAAAGTGATTCACCAACCTATGAAGTACAAGTAACCATCACTGATGCAGATATACCAAACACAACCATGTCGTCCGCATCTACATCAACTGAGAAGGATCACACAAGCCAGGATGTTTCCCTAGTGCTGCCTTCAACTTCTAAGAGGGACATGTCACTAGCATTATCATCTGCATTGCAAAGGGATTTACCTAGCCAAGGAGTGTCTGTTGCAACACCACAGGCATCAGAGAGGATGTATGTTTCTGAAACATCTCAGTGGAATGAAATTTCCCCAGAAACATCACAAAGGAGTGAAATTGTTCCACCAACTTGTGAGAGGAGTCATGTTTCTGTATCGCAGATGAATGGAAACTTATTTACCCCCAATAGGACTGATTCTGTTGCAGCTTTGAAACCAGAGGGGATATACTTGTCCACGTTTGGAAGTACTGACCCCATGTTTCCAACTTCTGAGAAATTATACACGCCTTCAATACTTTAG 2598 0.4172 METLNQSEPIGLRRMLPPTHGSFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKATSRLINCPFEAIGKKEEEAWVLTIKNGDHNHEPLKDISEHPYSRRFTEEEVRQIKQMTEAGIKPRQVLKALKQSNPDMQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSILVDTNNSPSGGSLNQNFQLLKVPNFIGGNFVDSLGSVIIDVINPATQEVVSQVHLTTYEEFKAAVSAAKQAFPSWKNTPITTRIRIMFKLQELIRRDIDKLAMNITIEQGKPSKGAERDVLHGIEVVEHACGMVNLQMGEFVPNAYNGIDTYCIREPLGVCAGICPLNFSATMPLWMFPIAVTCGNTYILNSCEKNPGVSMILAALAKEAGLPDGVLNIIHGTNDIVNYVCDDEDIKAVLFLGPITAGIYATAVGRGKRVQANAGCTNHILVMPDASLDATLDALVPACFDATGERCIAIFVGGSMQWEEKLVQRAKLLKVNAGTDPCADIGPVISKEAKERISGLVQRSVENGARLVLDGRDIVIPGYESGNFVGPTILCDVTTSIECYREEIFGPVLLCMQADNIDEAIAVINKNRYGNGASIFTTSSIAARRFQTEVEAGLVGINVPVPLPFSSNGSKASLAGKAGIQFYTQIKTVAHRWNDYPGIGVFPTTSPSKRDFPRQLSQAMPMESESDSPTYEVQVTITDADIPNTTMSSASTSTEKDHTSQDVSLVLPSTSKRDMSLALSSALQRDLPSQGVSVATPQASERMYVSETSQWNEISPETSQRSEIVPPTCERSHVSVSQMNGNLFTPNRTDSVAALKPEGIYLSTFGSTDPMFPTSEKLYTPSIL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02025 865 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 217 462 - -
Viun7g02025 865 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 214 674 IPR010061 GO:0004491
Viun7g02025 865 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 456 649 IPR016163 GO:0016620
Viun7g02025 865 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 456 650 - -
Viun7g02025 865 CDD ALDH_F6_MMSDH 213 674 IPR010061 GO:0004491
Viun7g02025 865 Pfam Aldehyde dehydrogenase family 228 670 IPR015590 GO:0016491
Viun7g02025 865 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 232 656 IPR016162 GO:0016491
Viun7g02025 865 MobiDBLite consensus disorder prediction 724 744 - -
Viun7g02025 865 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 52 680 IPR010061 GO:0004491
Viun7g02025 865 SUPERFAMILY ALDH-like 207 676 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02025 Viun-Chr7 25182374 25212110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02025 212 667 Aldehyde Dehydrogenase Gene Family AT2G14170 66.667 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02025 K00140 - gmx:100796803 1437.17