Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02001 ATGCCTTTCAAGAGGGACGTTGAGATCGGAAGGGTTGCTCAGATCAACTACGGCAAAGTGTATGGGAGGCTAGTGGTCATTGTCGACGTCATTGACCAGAACAGAGTACGAATGAAAAATTTACCTTGTTGGTTATTCCTTCTCGGACAAAAAGCATGGAAGTGTTTGGTCAAGGCAGTTCTAGTAAGTTACAACCTCCTTGTATTTGCAGTCCTTAAGCAAAGTTTTCTTCTCGCTGTTGTACCATCTTCAAGCCAGAAATCTTTATAG 270 0.4259 MPFKRDVEIGRVAQINYGKVYGRLVVIVDVIDQNRVRMKNLPCWLFLLGQKAWKCLVKAVLVSYNLLVFAVLKQSFLLAVVPSSSQKSL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02001 89 Gene3D - 1 46 IPR014722 -
Viun7g02001 89 PANTHER 60S RIBOSOMAL PROTEIN L14 1 37 IPR039660 GO:0003723|GO:0003735
Viun7g02001 89 SUPERFAMILY Translation proteins SH3-like domain 5 37 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02001 Viun-Chr7 25001340 25022682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02001 1 35 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 77.143 1.64e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02001 K02875 - gmx:100306120 67.0106